Oellrich A - Search Results

1

Using association rule mining to determine promising secondary phenotyping hypotheses.

Oellrich A, Jacobsen J, Papatheodorou I; Sanger Mouse Genetics Project; Smedley D. Oellrich A, et al. Bioinformatics. 2014 Jun 15;30(12):i52-59. doi: 10.1093/bioinformatics/btu260. Bioinformatics. 2014. PMID: 24932005 Free PMC article.

2

Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes.

Oellrich A, Collier N, Smedley D, Groza T. Oellrich A, et al. PLoS One. 2015 Jan 21;10(1):e0116040. doi: 10.1371/journal.pone.0116040. eCollection 2015. PLoS One. 2015. PMID: 25607983 Free PMC article.

3

Automatic concept recognition using the human phenotype ontology reference and test suite corpora.

Groza T, Köhler S, Doelken S, Collier N, Oellrich A, Smedley D, Couto FM, Baynam G, Zankl A, Robinson PN. Groza T, et al. Among authors: oellrich a. Database (Oxford). 2015 Feb 27;2015:bav005. doi: 10.1093/database/bav005. Print 2015. Database (Oxford). 2015. PMID: 25725061 Free PMC article.

4

Linking gene expression to phenotypes via pathway information.

Papatheodorou I, Oellrich A, Smedley D. Papatheodorou I, et al. Among authors: oellrich a. J Biomed Semantics. 2015 Apr 11;6:17. doi: 10.1186/s13326-015-0013-5. eCollection 2015. J Biomed Semantics. 2015. PMID: 25901272 Free PMC article.

5

Disease insights through cross-species phenotype comparisons.

Haendel MA, Vasilevsky N, Brush M, Hochheiser HS, Jacobsen J, Oellrich A, Mungall CJ, Washington N, Köhler S, Lewis SE, Robinson PN, Smedley D. Haendel MA, et al. Among authors: oellrich a. Mamm Genome. 2015 Oct;26(9-10):548-55. doi: 10.1007/s00335-015-9577-8. Epub 2015 Jun 20. Mamm Genome. 2015. PMID: 26092691 Free PMC article. Review.

6

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.

Collier N, Groza T, Smedley D, Robinson PN, Oellrich A, Rebholz-Schuhmann D. Collier N, et al. Among authors: oellrich a. Database (Oxford). 2015 Oct 27;2015:bav104. doi: 10.1093/database/bav104. Print 2015. Database (Oxford). 2015. PMID: 26507285 Free PMC article.

7

PhenoDigm: analyzing curated annotations to associate animal models with human diseases.

Smedley D, Oellrich A, Köhler S, Ruef B; Sanger Mouse Genetics Project; Westerfield M, Robinson P, Lewis S, Mungall C. Smedley D, et al. Among authors: oellrich a. Database (Oxford). 2013 May 9;2013:bat025. doi: 10.1093/database/bat025. Print 2013. Database (Oxford). 2013. PMID: 23660285 Free PMC article.

8

Linking tissues to phenotypes using gene expression profiles.

Oellrich A; Sanger Mouse Genetics Project; Smedley D. Oellrich A, et al. Database (Oxford). 2014 Mar 13;2014:bau017. doi: 10.1093/database/bau017. Print 2014. Database (Oxford). 2014. PMID: 24634472 Free PMC article.

9

The influence of disease categories on gene candidate predictions from model organism phenotypes.

Oellrich A, Koehler S, Washington N; Sanger Mouse Genetic Project; Mungall C, Lewis S, Haendel M, Robinson PN, Smedley D. Oellrich A, et al. J Biomed Semantics. 2014 Jun 3;5(Suppl 1 Proceedings of the Bio-Ontologies Spec Interest G):S4. doi: 10.1186/2041-1480-5-S1-S4. eCollection 2014. J Biomed Semantics. 2014. PMID: 25093073 Free PMC article.

10

A gene expression resource generated by genome-wide lacZ profiling in the mouse.

Tuck E, Estabel J, Oellrich A, Maguire AK, Adissu HA, Souter L, Siragher E, Lillistone C, Green AL, Wardle-Jones H, Carragher DM, Karp NA, Smedley D, Adams NC; Sanger Institute Mouse Genetics Project; Bussell JN, Adams DJ, Ramírez-Solis R, Steel KP, Galli A, White JK. Tuck E, et al. Among authors: oellrich a. Dis Model Mech. 2015 Nov;8(11):1467-78. doi: 10.1242/dmm.021238. Epub 2015 Aug 20. Dis Model Mech. 2015. PMID: 26398943 Free PMC article.

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