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IVT-seq reveals extreme bias in RNA sequencing.
Lahens NF, Kavakli IH, Zhang R, Hayer K, Black MB, Dueck H, Pizarro A, Kim J, Irizarry R, Thomas RS, Grant GR, Hogenesch JB. Lahens NF, et al. Among authors: hogenesch jb. Genome Biol. 2014 Jun 30;15(6):R86. doi: 10.1186/gb-2014-15-6-r86. Genome Biol. 2014. PMID: 24981968 Free PMC article.
Considerations for RNA-seq analysis of circadian rhythms.
Li J, Grant GR, Hogenesch JB, Hughes ME. Li J, et al. Among authors: hogenesch jb. Methods Enzymol. 2015;551:349-67. doi: 10.1016/bs.mie.2014.10.020. Epub 2014 Dec 26. Methods Enzymol. 2015. PMID: 25662464
CAMPAREE: a robust and configurable RNA expression simulator.
Lahens NF, Brooks TG, Sarantopoulou D, Nayak S, Lawrence C, Mrčela A, Srinivasan A, Schug J, Hogenesch JB, Barash Y, Grant GR. Lahens NF, et al. Among authors: hogenesch jb. BMC Genomics. 2021 Sep 25;22(1):692. doi: 10.1186/s12864-021-07934-2. BMC Genomics. 2021. PMID: 34563123 Free PMC article.
CircaDB: a database of mammalian circadian gene expression profiles.
Pizarro A, Hayer K, Lahens NF, Hogenesch JB. Pizarro A, et al. Among authors: hogenesch jb. Nucleic Acids Res. 2013 Jan;41(Database issue):D1009-13. doi: 10.1093/nar/gks1161. Epub 2012 Nov 24. Nucleic Acids Res. 2013. PMID: 23180795 Free PMC article.
181 results