Qiu P - Search Results

1

COSMID: A Web-based Tool for Identifying and Validating CRISPR/Cas Off-target Sites.

Cradick TJ, Qiu P, Lee CM, Fine EJ, Bao G. Cradick TJ, et al. Among authors: qiu p. Mol Ther Nucleic Acids. 2014 Dec 2;3(12):e214. doi: 10.1038/mtna.2014.64. Mol Ther Nucleic Acids. 2014. PMID: 25462530 Free PMC article.

2

GDISC: a web portal for integrative analysis of gene-drug interaction for survival in cancer.

Spainhour JCG, Lim J, Qiu P. Spainhour JCG, et al. Among authors: qiu p. Bioinformatics. 2017 May 1;33(9):1426-1428. doi: 10.1093/bioinformatics/btw830. Bioinformatics. 2017. PMID: 28453687 Free PMC article.

3

Identifying gene expression patterns associated with drug-specific survival in cancer patients.

Neary B, Zhou J, Qiu P. Neary B, et al. Among authors: qiu p. Sci Rep. 2021 Mar 2;11(1):5004. doi: 10.1038/s41598-021-84211-y. Sci Rep. 2021. PMID: 33654134 Free PMC article.

4

Methylation of CpG Sites as Biomarkers Predictive of Drug-Specific Patient Survival in Cancer.

Neary B, Lin S, Qiu P. Neary B, et al. Among authors: qiu p. Cancer Inform. 2022 Nov 2;21:11769351221131124. doi: 10.1177/11769351221131124. eCollection 2022. Cancer Inform. 2022. PMID: 36340286 Free PMC article.

5

Bridging Mechanistic and Phenomenological Models of Complex Biological Systems.

Transtrum MK, Qiu P. Transtrum MK, et al. Among authors: qiu p. PLoS Comput Biol. 2016 May 17;12(5):e1004915. doi: 10.1371/journal.pcbi.1004915. eCollection 2016 May. PLoS Comput Biol. 2016. PMID: 27187545 Free PMC article.

6

Model reduction by manifold boundaries.

Transtrum MK, Qiu P. Transtrum MK, et al. Among authors: qiu p. Phys Rev Lett. 2014 Aug 29;113(9):098701. doi: 10.1103/PhysRevLett.113.098701. Epub 2014 Aug 29. Phys Rev Lett. 2014. PMID: 25216014 Free PMC article.

7

Comprehensive analysis of TCGA data reveals correlation between DNA methylation and alternative splicing.

Lin S, Yi S, Qiu P. Lin S, et al. Among authors: qiu p. BMC Genomics. 2022 Nov 18;23(1):758. doi: 10.1186/s12864-022-08992-w. BMC Genomics. 2022. PMID: 36401166 Free PMC article.

8

Identification of gene-drug interactions that impact patient survival in TCGA.

Spainhour JC, Qiu P. Spainhour JC, et al. Among authors: qiu p. BMC Bioinformatics. 2016 Oct 6;17(1):409. doi: 10.1186/s12859-016-1255-7. BMC Bioinformatics. 2016. PMID: 27716027 Free PMC article.

9

Leveraging TCGA gene expression data to build predictive models for cancer drug response.

Clayton EA, Pujol TA, McDonald JF, Qiu P. Clayton EA, et al. Among authors: qiu p. BMC Bioinformatics. 2020 Sep 30;21(Suppl 14):364. doi: 10.1186/s12859-020-03690-4. BMC Bioinformatics. 2020. PMID: 32998700 Free PMC article.

10

Characterization of Expression-Based Gene Clusters Gives Insights into Variation in Patient Response to Cancer Therapies.

Neary B, Qiu P. Neary B, et al. Among authors: qiu p. Cancer Inform. 2024 Sep 4;23:11769351241271560. doi: 10.1177/11769351241271560. eCollection 2024. Cancer Inform. 2024. PMID: 39238656 Free PMC article.

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