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An Arabidopsis gene regulatory network for secondary cell wall synthesis.
Taylor-Teeples M, Lin L, de Lucas M, Turco G, Toal TW, Gaudinier A, Young NF, Trabucco GM, Veling MT, Lamothe R, Handakumbura PP, Xiong G, Wang C, Corwin J, Tsoukalas A, Zhang L, Ware D, Pauly M, Kliebenstein DJ, Dehesh K, Tagkopoulos I, Breton G, Pruneda-Paz JL, Ahnert SE, Kay SA, Hazen SP, Brady SM. Taylor-Teeples M, et al. Among authors: handakumbura pp. Nature. 2015 Jan 29;517(7536):571-5. doi: 10.1038/nature14099. Epub 2014 Dec 24. Nature. 2015. PMID: 25533953 Free PMC article.
SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae.
Handakumbura PP, Brow K, Whitney IP, Zhao K, Sanguinet KA, Lee SJ, Olins J, Romero-Gamboa SP, Harrington MJ, Bascom CJ, MacKinnon KJ, Veling MT, Liu L, Lee JE, Vogel JP, O'Malley RC, Bezanilla M, Bartley LE, Hazen SP. Handakumbura PP, et al. Plant J. 2018 Nov;96(3):532-545. doi: 10.1111/tpj.14047. Epub 2018 Sep 12. Plant J. 2018. PMID: 30054951 Free article.
Activation of the plant mevalonate pathway by extracellular ATP.
Cho SH, Tóth K, Kim D, Vo PH, Lin CH, Handakumbura PP, Ubach AR, Evans S, Paša-Tolić L, Stacey G. Cho SH, et al. Among authors: handakumbura pp. Nat Commun. 2022 Jan 21;13(1):450. doi: 10.1038/s41467-022-28150-w. Nat Commun. 2022. PMID: 35064110 Free PMC article.
Metabotyping as a Stopover in Genome-to-Phenome Mapping.
Handakumbura PP, Stanfill B, Rivas-Ubach A, Fortin D, Vogel JP, Jansson C. Handakumbura PP, et al. Sci Rep. 2019 Feb 12;9(1):1858. doi: 10.1038/s41598-019-38483-0. Sci Rep. 2019. PMID: 30755686 Free PMC article.
Vision, challenges and opportunities for a Plant Cell Atlas.
Plant Cell Atlas Consortium; Jha SG, Borowsky AT, Cole BJ, Fahlgren N, Farmer A, Huang SC, Karia P, Libault M, Provart NJ, Rice SL, Saura-Sanchez M, Agarwal P, Ahkami AH, Anderton CR, Briggs SP, Brophy JA, Denolf P, Di Costanzo LF, Exposito-Alonso M, Giacomello S, Gomez-Cano F, Kaufmann K, Ko DK, Kumar S, Malkovskiy AV, Nakayama N, Obata T, Otegui MS, Palfalvi G, Quezada-Rodríguez EH, Singh R, Uhrig RG, Waese J, Van Wijk K, Wright RC, Ehrhardt DW, Birnbaum KD, Rhee SY. Plant Cell Atlas Consortium, et al. Elife. 2021 Sep 7;10:e66877. doi: 10.7554/eLife.66877. Elife. 2021. PMID: 34491200 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 33830258
Crops for Carbon Farming.
Jansson C, Faiola C, Wingler A, Zhu XG, Kravchenko A, de Graaff MA, Ogden AJ, Handakumbura PP, Werner C, Beckles DM. Jansson C, et al. Among authors: handakumbura pp. Front Plant Sci. 2021 Jun 4;12:636709. doi: 10.3389/fpls.2021.636709. eCollection 2021. Front Plant Sci. 2021. PMID: 34149744 Free PMC article.
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