Zarecki R - Search Results

1

Improved evidence-based genome-scale metabolic models for maize leaf, embryo, and endosperm.

Seaver SM, Bradbury LM, Frelin O, Zarecki R, Ruppin E, Hanson AD, Henry CS. Seaver SM, et al. Among authors: zarecki r. Front Plant Sci. 2015 Mar 10;6:142. doi: 10.3389/fpls.2015.00142. eCollection 2015. Front Plant Sci. 2015. PMID: 25806041 Free PMC article.

2

Competitive and cooperative metabolic interactions in bacterial communities.

Freilich S, Zarecki R, Eilam O, Segal ES, Henry CS, Kupiec M, Gophna U, Sharan R, Ruppin E. Freilich S, et al. Among authors: zarecki r. Nat Commun. 2011 Dec 13;2:589. doi: 10.1038/ncomms1597. Nat Commun. 2011. PMID: 22158444 Free article.

3

Maximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms.

Zarecki R, Oberhardt MA, Yizhak K, Wagner A, Shtifman Segal E, Freilich S, Henry CS, Gophna U, Ruppin E. Zarecki R, et al. PLoS One. 2014 May 27;9(5):e98372. doi: 10.1371/journal.pone.0098372. eCollection 2014. PLoS One. 2014. PMID: 24866123 Free PMC article.

4

Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli.

Oberhardt MA, Zarecki R, Reshef L, Xia F, Duran-Frigola M, Schreiber R, Henry CS, Ben-Tal N, Dwyer DJ, Gophna U, Ruppin E. Oberhardt MA, et al. Among authors: zarecki r. PLoS Comput Biol. 2016 Jan 28;12(1):e1004705. doi: 10.1371/journal.pcbi.1004705. eCollection 2016 Jan. PLoS Comput Biol. 2016. PMID: 26821166 Free PMC article.

5

Computational evaluation of cellular metabolic costs successfully predicts genes whose expression is deleterious.

Wagner A, Zarecki R, Reshef L, Gochev C, Sorek R, Gophna U, Ruppin E. Wagner A, et al. Among authors: zarecki r. Proc Natl Acad Sci U S A. 2013 Nov 19;110(47):19166-71. doi: 10.1073/pnas.1312361110. Epub 2013 Nov 6. Proc Natl Acad Sci U S A. 2013. PMID: 24198337 Free PMC article.

6

A novel nutritional predictor links microbial fastidiousness with lowered ubiquity, growth rate, and cooperativeness.

Zarecki R, Oberhardt MA, Reshef L, Gophna U, Ruppin E. Zarecki R, et al. PLoS Comput Biol. 2014 Jul 17;10(7):e1003726. doi: 10.1371/journal.pcbi.1003726. eCollection 2014 Jul. PLoS Comput Biol. 2014. PMID: 25033033 Free PMC article.

7

Glycan degradation (GlyDeR) analysis predicts mammalian gut microbiota abundance and host diet-specific adaptations.

Eilam O, Zarecki R, Oberhardt M, Ursell LK, Kupiec M, Knight R, Gophna U, Ruppin E. Eilam O, et al. Among authors: zarecki r. mBio. 2014 Aug 12;5(4):e01526-14. doi: 10.1128/mBio.01526-14. mBio. 2014. PMID: 25118239 Free PMC article.

8

Harnessing the landscape of microbial culture media to predict new organism-media pairings.

Oberhardt MA, Zarecki R, Gronow S, Lang E, Klenk HP, Gophna U, Ruppin E. Oberhardt MA, et al. Among authors: zarecki r. Nat Commun. 2015 Oct 13;6:8493. doi: 10.1038/ncomms9493. Nat Commun. 2015. PMID: 26460590 Free PMC article.

9

Diet-induced changes of redox potential underlie compositional shifts in the rumen archaeal community.

Friedman N, Shriker E, Gold B, Durman T, Zarecki R, Ruppin E, Mizrahi I. Friedman N, et al. Among authors: zarecki r. Environ Microbiol. 2017 Jan;19(1):174-184. doi: 10.1111/1462-2920.13551. Epub 2016 Dec 12. Environ Microbiol. 2017. PMID: 27696646

10

Gut microbiota dependent anti-tumor immunity restricts melanoma growth in Rnf5^-/- mice.

Li Y, Tinoco R, Elmén L, Segota I, Xian Y, Fujita Y, Sahu A, Zarecki R, Marie K, Feng Y, Khateb A, Frederick DT, Ashkenazi SK, Kim H, Perez EG, Day CP, Segura Muñoz RS, Schmaltz R, Yooseph S, Tam MA, Zhang T, Avitan-Hersh E, Tzur L, Roizman S, Boyango I, Bar-Sela G, Orian A, Kaufman RJ, Bosenberg M, Goding CR, Baaten B, Levesque MP, Dummer R, Brown K, Merlino G, Ruppin E, Flaherty K, Ramer-Tait A, Long T, Peterson SN, Bradley LM, Ronai ZA. Li Y, et al. Among authors: zarecki r. Nat Commun. 2019 Apr 2;10(1):1492. doi: 10.1038/s41467-019-09525-y. Nat Commun. 2019. PMID: 30940817 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

17 results

Search Page

Filters