Koçer A - Search Results

1

Top-down mass spectrometry of intact membrane protein complexes reveals oligomeric state and sequence information in a single experiment.

Konijnenberg A, Bannwarth L, Yilmaz D, Koçer A, Venien-Bryan C, Sobott F. Konijnenberg A, et al. Among authors: kocer a. Protein Sci. 2015 Aug;24(8):1292-300. doi: 10.1002/pro.2703. Epub 2015 May 29. Protein Sci. 2015. PMID: 25970171 Free PMC article.

2

Global structural changes of an ion channel during its gating are followed by ion mobility mass spectrometry.

Konijnenberg A, Yilmaz D, Ingólfsson HI, Dimitrova A, Marrink SJ, Li Z, Vénien-Bryan C, Sobott F, Koçer A. Konijnenberg A, et al. Among authors: kocer a. Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):17170-5. doi: 10.1073/pnas.1413118111. Epub 2014 Nov 17. Proc Natl Acad Sci U S A. 2014. PMID: 25404294 Free PMC article.

3

Bright ion channels and lipid bilayers.

Szymański W, Yilmaz D, Koçer A, Feringa BL. Szymański W, et al. Among authors: kocer a. Acc Chem Res. 2013 Dec 17;46(12):2910-23. doi: 10.1021/ar4000357. Epub 2013 Apr 18. Acc Chem Res. 2013. PMID: 23597020 Review.

4

Study of light-induced MscL gating by EPR spectroscopy.

Yilmaz D, Dimitrova AI, Walko M, Kocer A. Yilmaz D, et al. Among authors: kocer a. Eur Biophys J. 2015 Oct;44(7):557-65. doi: 10.1007/s00249-015-1063-4. Epub 2015 Aug 19. Eur Biophys J. 2015. PMID: 26286445 Free PMC article.

5

Phytochemicals perturb membranes and promiscuously alter protein function.

Ingólfsson HI, Thakur P, Herold KF, Hobart EA, Ramsey NB, Periole X, de Jong DH, Zwama M, Yilmaz D, Hall K, Maretzky T, Hemmings HC Jr, Blobel C, Marrink SJ, Koçer A, Sack JT, Andersen OS. Ingólfsson HI, et al. Among authors: kocer a. ACS Chem Biol. 2014 Aug 15;9(8):1788-98. doi: 10.1021/cb500086e. Epub 2014 Jun 17. ACS Chem Biol. 2014. PMID: 24901212 Free PMC article.

6

In vitro synthesis and oligomerization of the mechanosensitive channel of large conductance, MscL, into a functional ion channel.

Price CE, Kocer A, Kol S, van der Berg JP, Driessen AJ. Price CE, et al. Among authors: kocer a. FEBS Lett. 2011 Jan 3;585(1):249-54. doi: 10.1016/j.febslet.2010.11.057. Epub 2010 Dec 8. FEBS Lett. 2011. PMID: 21134371 Free article.

7

The activation mode of the mechanosensitive ion channel, MscL, by lysophosphatidylcholine differs from tension-induced gating.

Mukherjee N, Jose MD, Birkner JP, Walko M, Ingólfsson HI, Dimitrova A, Arnarez C, Marrink SJ, Koçer A. Mukherjee N, et al. Among authors: kocer a. FASEB J. 2014 Oct;28(10):4292-302. doi: 10.1096/fj.14-251579. Epub 2014 Jun 23. FASEB J. 2014. PMID: 24958207 Free PMC article.

8

High-Throughput Simulations Reveal Membrane-Mediated Effects of Alcohols on MscL Gating.

Melo MN, Arnarez C, Sikkema H, Kumar N, Walko M, Berendsen HJ, Kocer A, Marrink SJ, Ingólfsson HI. Melo MN, et al. Among authors: kocer a. J Am Chem Soc. 2017 Feb 22;139(7):2664-2671. doi: 10.1021/jacs.6b11091. Epub 2017 Feb 10. J Am Chem Soc. 2017. PMID: 28122455 Free PMC article.

9

On the role of individual subunits in MscL gating: "all for one, one for all?".

Mika JT, Birkner JP, Poolman B, Koçer A. Mika JT, et al. Among authors: kocer a. FASEB J. 2013 Mar;27(3):882-92. doi: 10.1096/fj.12-214361. Epub 2012 Nov 27. FASEB J. 2013. PMID: 23193173

10

Hydrophobic gating of mechanosensitive channel of large conductance evidenced by single-subunit resolution.

Birkner JP, Poolman B, Koçer A. Birkner JP, et al. Among authors: kocer a. Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):12944-9. doi: 10.1073/pnas.1205270109. Epub 2012 Jul 23. Proc Natl Acad Sci U S A. 2012. PMID: 22826215 Free PMC article.

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