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Page 1
The Classification and Evolution of Enzyme Function.
Martínez Cuesta S, Rahman SA, Furnham N, Thornton JM. Martínez Cuesta S, et al. Biophys J. 2015 Sep 15;109(6):1082-6. doi: 10.1016/j.bpj.2015.04.020. Epub 2015 May 15. Biophys J. 2015. PMID: 25986631 Free PMC article. Review.
The evolution of enzyme function in the isomerases.
Martinez Cuesta S, Furnham N, Rahman SA, Sillitoe I, Thornton JM. Martinez Cuesta S, et al. Curr Opin Struct Biol. 2014 Jun;26:121-30. doi: 10.1016/j.sbi.2014.06.002. Epub 2014 Jul 5. Curr Opin Struct Biol. 2014. PMID: 25000289 Free PMC article. Review.
Characterising Complex Enzyme Reaction Data.
Dönertaş HM, Martínez Cuesta S, Rahman SA, Thornton JM. Dönertaş HM, et al. Among authors: martinez cuesta s. PLoS One. 2016 Feb 3;11(2):e0147952. doi: 10.1371/journal.pone.0147952. eCollection 2016. PLoS One. 2016. PMID: 26840640 Free PMC article.
Exploring the chemistry and evolution of the isomerases.
Martínez Cuesta S, Rahman SA, Thornton JM. Martínez Cuesta S, et al. Proc Natl Acad Sci U S A. 2016 Feb 16;113(7):1796-801. doi: 10.1073/pnas.1509494113. Epub 2016 Feb 3. Proc Natl Acad Sci U S A. 2016. PMID: 26842835 Free PMC article.
Reaction Decoder Tool (RDT): extracting features from chemical reactions.
Rahman SA, Torrance G, Baldacci L, Martínez Cuesta S, Fenninger F, Gopal N, Choudhary S, May JW, Holliday GL, Steinbeck C, Thornton JM. Rahman SA, et al. Among authors: martinez cuesta s. Bioinformatics. 2016 Jul 1;32(13):2065-6. doi: 10.1093/bioinformatics/btw096. Epub 2016 Feb 22. Bioinformatics. 2016. PMID: 27153692 Free PMC article.
Genetic interactions of G-quadruplexes in humans.
Zyner KG, Mulhearn DS, Adhikari S, Martínez Cuesta S, Di Antonio M, Erard N, Hannon GJ, Tannahill D, Balasubramanian S. Zyner KG, et al. Among authors: martinez cuesta s. Elife. 2019 Jul 9;8:e46793. doi: 10.7554/eLife.46793. Elife. 2019. PMID: 31287417 Free PMC article.
DNA G-quadruplex structures mold the DNA methylome.
Mao SQ, Ghanbarian AT, Spiegel J, Martínez Cuesta S, Beraldi D, Di Antonio M, Marsico G, Hänsel-Hertsch R, Tannahill D, Balasubramanian S. Mao SQ, et al. Among authors: martinez cuesta s. Nat Struct Mol Biol. 2018 Oct;25(10):951-957. doi: 10.1038/s41594-018-0131-8. Epub 2018 Oct 1. Nat Struct Mol Biol. 2018. PMID: 30275516 Free PMC article.
Sequencing abasic sites in DNA at single-nucleotide resolution.
Liu ZJ, Martínez Cuesta S, van Delft P, Balasubramanian S. Liu ZJ, et al. Among authors: martinez cuesta s. Nat Chem. 2019 Jul;11(7):629-637. doi: 10.1038/s41557-019-0279-9. Epub 2019 Jun 17. Nat Chem. 2019. PMID: 31209299 Free PMC article.
5-Formylcytosine organizes nucleosomes and forms Schiff base interactions with histones in mouse embryonic stem cells.
Raiber EA, Portella G, Martínez Cuesta S, Hardisty R, Murat P, Li Z, Iurlaro M, Dean W, Spindel J, Beraldi D, Liu Z, Dawson MA, Reik W, Balasubramanian S. Raiber EA, et al. Among authors: martinez cuesta s. Nat Chem. 2018 Dec;10(12):1258-1266. doi: 10.1038/s41557-018-0149-x. Epub 2018 Oct 22. Nat Chem. 2018. PMID: 30349137 Free article.
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