Jaschob D - Search Results

1

Visualization and dissemination of multidimensional proteomics data comparing protein abundance during Caenorhabditis elegans development.

Riffle M, Merrihew GE, Jaschob D, Sharma V, Davis TN, Noble WS, MacCoss MJ. Riffle M, et al. Among authors: jaschob d. J Am Soc Mass Spectrom. 2015 Nov;26(11):1827-36. doi: 10.1007/s13361-015-1193-z. Epub 2015 Jul 2. J Am Soc Mass Spectrom. 2015. PMID: 26133526 Free PMC article.

2

SnipViz: a compact and lightweight web site widget for display and dissemination of multiple versions of gene and protein sequences.

Jaschob D, Davis TN, Riffle M. Jaschob D, et al. BMC Res Notes. 2014 Jul 23;7:468. doi: 10.1186/1756-0500-7-468. BMC Res Notes. 2014. PMID: 25056180 Free PMC article.

3

ProXL (Protein Cross-Linking Database): A Platform for Analysis, Visualization, and Sharing of Protein Cross-Linking Mass Spectrometry Data.

Riffle M, Jaschob D, Zelter A, Davis TN. Riffle M, et al. Among authors: jaschob d. J Proteome Res. 2016 Aug 5;15(8):2863-70. doi: 10.1021/acs.jproteome.6b00274. Epub 2016 Jun 24. J Proteome Res. 2016. PMID: 27302480 Free PMC article.

4

Proxl (Protein Cross-Linking Database): A Public Server, QC Tools, and Other Major Updates.

Riffle M, Jaschob D, Zelter A, Davis TN. Riffle M, et al. Among authors: jaschob d. J Proteome Res. 2019 Feb 1;18(2):759-764. doi: 10.1021/acs.jproteome.8b00726. Epub 2018 Dec 19. J Proteome Res. 2019. PMID: 30525651 Free PMC article.

5

Mason: a JavaScript web site widget for visualizing and comparing annotated features in nucleotide or protein sequences.

Jaschob D, Davis TN, Riffle M. Jaschob D, et al. BMC Res Notes. 2015 Mar 7;8:70. doi: 10.1186/s13104-015-1009-z. BMC Res Notes. 2015. PMID: 25884379 Free PMC article.

6

The molecular architecture of the Dam1 kinetochore complex is defined by cross-linking based structural modelling.

Zelter A, Bonomi M, Kim JO, Umbreit NT, Hoopmann MR, Johnson R, Riffle M, Jaschob D, MacCoss MJ, Moritz RL, Davis TN. Zelter A, et al. Among authors: jaschob d. Nat Commun. 2015 Nov 12;6:8673. doi: 10.1038/ncomms9673. Nat Commun. 2015. PMID: 26560693 Free PMC article.

7

MetaGOmics: A Web-Based Tool for Peptide-Centric Functional and Taxonomic Analysis of Metaproteomics Data.

Riffle M, May DH, Timmins-Schiffman E, Mikan MP, Jaschob D, Noble WS, Nunn BL. Riffle M, et al. Among authors: jaschob d. Proteomes. 2017 Dec 27;6(1):2. doi: 10.3390/proteomes6010002. Proteomes. 2017. PMID: 29280960 Free PMC article.

8

Discovery and Visualization of Uncharacterized Drug-Protein Adducts Using Mass Spectrometry.

Riffle M, Hoopmann MR, Jaschob D, Zhong G, Moritz RL, MacCoss MJ, Davis TN, Isoherranen N, Zelter A. Riffle M, et al. Among authors: jaschob d. Anal Chem. 2022 Mar 1;94(8):3501-3509. doi: 10.1021/acs.analchem.1c04101. Epub 2022 Feb 20. Anal Chem. 2022. PMID: 35184559 Free PMC article.

9

JobCenter: an open source, cross-platform, and distributed job queue management system optimized for scalability and versatility.

Jaschob D, Riffle M. Jaschob D, et al. Source Code Biol Med. 2012 Jul 30;7(1):8. doi: 10.1186/1751-0473-7-8. Source Code Biol Med. 2012. PMID: 22846423 Free PMC article.

10

Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast.

Skelly DA, Merrihew GE, Riffle M, Connelly CF, Kerr EO, Johansson M, Jaschob D, Graczyk B, Shulman NJ, Wakefield J, Cooper SJ, Fields S, Noble WS, Muller EG, Davis TN, Dunham MJ, Maccoss MJ, Akey JM. Skelly DA, et al. Among authors: jaschob d. Genome Res. 2013 Sep;23(9):1496-504. doi: 10.1101/gr.155762.113. Epub 2013 May 29. Genome Res. 2013. PMID: 23720455 Free PMC article.

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