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The NIH BD2K center for big data in translational genomics.
Paten B, Diekhans M, Druker BJ, Friend S, Guinney J, Gassner N, Guttman M, Kent WJ, Mantey P, Margolin AA, Massie M, Novak AM, Nothaft F, Pachter L, Patterson D, Smuga-Otto M, Stuart JM, Van't Veer L, Wold B, Haussler D. Paten B, et al. Among authors: patterson d. J Am Med Inform Assoc. 2015 Nov;22(6):1143-7. doi: 10.1093/jamia/ocv047. Epub 2015 Jul 13. J Am Med Inform Assoc. 2015. PMID: 26174866 Free PMC article.
Toil enables reproducible, open source, big biomedical data analyses.
Vivian J, Rao AA, Nothaft FA, Ketchum C, Armstrong J, Novak A, Pfeil J, Narkizian J, Deran AD, Musselman-Brown A, Schmidt H, Amstutz P, Craft B, Goldman M, Rosenbloom K, Cline M, O'Connor B, Hanna M, Birger C, Kent WJ, Patterson DA, Joseph AD, Zhu J, Zaranek S, Getz G, Haussler D, Paten B. Vivian J, et al. Among authors: patterson da. Nat Biotechnol. 2017 Apr 11;35(4):314-316. doi: 10.1038/nbt.3772. Nat Biotechnol. 2017. PMID: 28398314 Free PMC article. No abstract available.
GenAp: a distributed SQL interface for genomic data.
Kozanitis C, Patterson DA. Kozanitis C, et al. BMC Bioinformatics. 2016 Feb 4;17:63. doi: 10.1186/s12859-016-0904-1. BMC Bioinformatics. 2016. PMID: 26846841 Free PMC article.
SMaSH: a benchmarking toolkit for human genome variant calling.
Talwalkar A, Liptrap J, Newcomb J, Hartl C, Terhorst J, Curtis K, Bresler M, Song YS, Jordan MI, Patterson D. Talwalkar A, et al. Among authors: patterson d. Bioinformatics. 2014 Oct;30(19):2787-95. doi: 10.1093/bioinformatics/btu345. Epub 2014 Jun 3. Bioinformatics. 2014. PMID: 24894505 Free PMC article.
Suboptimal Titration of Heart Failure Medications in Pediatric Patients: Baseline Data from ACTION.
Nandi D, Wright LK, Sublett-Smith J, Brax A, Bansal N, Almond CS, Azeka E, Butts R, Chen S, Conway J, Cunningham C, Fisher LA, Hall EK, Hunter T, Kobayashi R, Patterson D, Peng DM, Simpson KE, Ryan TD, Spinner JA, Wisotzkey B, Zangwill S, Gajarski RJ, O'Connor M. Nandi D, et al. Among authors: patterson d. J Card Fail. 2024 Nov 20:S1071-9164(24)00928-X. doi: 10.1016/j.cardfail.2024.10.445. Online ahead of print. J Card Fail. 2024. PMID: 39577739 No abstract available.
High-Frequency 10-kHz Spinal Cord Stimulation Provides Long-term (24-Month) Improvements in Diabetes-Related Pain and Quality of Life for Patients with Painful Diabetic Neuropathy.
Petersen EA, Stauss TG, Scowcroft JA, Jaasma MJ, Edgar DR, White JL, Sills SM, Amirdelfan K, Guirguis MN, Xu J, Yu C, Nairizi A, Patterson DG, Creamer MJ, Galan V, Bundschu RH, Mehta ND, Sayed D, Lad SP, DiBenedetto DJ, Sethi KA, Goree JH, Bennett MT, Harrison NJ, Israel AF, Chang P, Wu PW, Argoff CE, Nasr CE, Taylor RS, Caraway DL, Mekhail NA. Petersen EA, et al. Among authors: patterson dg. J Diabetes Sci Technol. 2024 Oct 6:19322968241268547. doi: 10.1177/19322968241268547. Online ahead of print. J Diabetes Sci Technol. 2024. PMID: 39369310 Free PMC article.
2,081 results