Tyo KE - Search Results

1

MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics.

Jeffryes JG, Colastani RL, Elbadawi-Sidhu M, Kind T, Niehaus TD, Broadbelt LJ, Hanson AD, Fiehn O, Tyo KE, Henry CS. Jeffryes JG, et al. Among authors: tyo ke. J Cheminform. 2015 Aug 28;7:44. doi: 10.1186/s13321-015-0087-1. eCollection 2015. J Cheminform. 2015. PMID: 26322134 Free PMC article.

2

A massively parallel in vivo assay of TdT mutants yields variants with altered nucleotide insertion biases.

Carlson CK, Loveless TB, Milisavljevic M, Kelly PI, Mills JH, Tyo KEJ, Liu CC. Carlson CK, et al. Among authors: tyo kej. bioRxiv [Preprint]. 2024 Jun 11:2024.06.11.598561. doi: 10.1101/2024.06.11.598561. bioRxiv. 2024. Update in: ACS Synth Biol. 2024 Oct 18;13(10):3326-3343. doi: 10.1021/acssynbio.4c00414 PMID: 38915690 Free PMC article. Updated. Preprint.

3

Post-translation digital data encoding into the genomes of mammalian cell populations.

Callisto A, Strutz J, Leeper K, Kalhor R, Church G, Tyo KEJ, Bhan N. Callisto A, et al. Among authors: tyo kej. bioRxiv [Preprint]. 2024 May 12:2024.05.12.591851. doi: 10.1101/2024.05.12.591851. bioRxiv. 2024. PMID: 38765976 Free PMC article. Preprint.

4

Computational tools for guided discovery and engineering of metabolic pathways.

Moura M, Broadbelt L, Tyo K. Moura M, et al. Methods Mol Biol. 2013;985:123-47. doi: 10.1007/978-1-62703-299-5_8. Methods Mol Biol. 2013. PMID: 23417803 Review.

5

Efficient searching and annotation of metabolic networks using chemical similarity.

Pertusi DA, Stine AE, Broadbelt LJ, Tyo KE. Pertusi DA, et al. Among authors: tyo ke. Bioinformatics. 2015 Apr 1;31(7):1016-24. doi: 10.1093/bioinformatics/btu760. Epub 2014 Nov 21. Bioinformatics. 2015. PMID: 25417203 Free PMC article.

6

Characterizing and predicting carboxylic acid reductase activity for diversifying bioaldehyde production.

Moura M, Pertusi D, Lenzini S, Bhan N, Broadbelt LJ, Tyo KE. Moura M, et al. Among authors: tyo ke. Biotechnol Bioeng. 2016 May;113(5):944-52. doi: 10.1002/bit.25860. Epub 2015 Nov 10. Biotechnol Bioeng. 2016. PMID: 26479709

7

Evaluating enzymatic synthesis of small molecule drugs.

Moura M, Finkle J, Stainbrook S, Greene J, Broadbelt LJ, Tyo KEJ. Moura M, et al. Metab Eng. 2016 Jan;33:138-147. doi: 10.1016/j.ymben.2015.11.006. Epub 2015 Dec 4. Metab Eng. 2016. PMID: 26655066

8

Exploring De Novo metabolic pathways from pyruvate to propionic acid.

Stine A, Zhang M, Ro S, Clendennen S, Shelton MC, Tyo KE, Broadbelt LJ. Stine A, et al. Among authors: tyo ke. Biotechnol Prog. 2016 Mar;32(2):303-11. doi: 10.1002/btpr.2233. Epub 2016 Mar 3. Biotechnol Prog. 2016. PMID: 26821575

9

Draft Genome Sequence of a Multidrug-Resistant Klebsiella quasipneumoniae subsp. similipneumoniae Isolate from a Clinical Source.

Ozer EA, Morris AR, Krapp F, Henry CS, Tyo KE, Lathem WW, Hauser AR. Ozer EA, et al. Among authors: tyo ke. Genome Announc. 2016 May 26;4(3):e00422-16. doi: 10.1128/genomeA.00422-16. Genome Announc. 2016. PMID: 27231362 Free PMC article.

10

Generation and Validation of the iKp1289 Metabolic Model for Klebsiella pneumoniae KPPR1.

Henry CS, Rotman E, Lathem WW, Tyo KE, Hauser AR, Mandel MJ. Henry CS, et al. Among authors: tyo ke. J Infect Dis. 2017 Feb 15;215(suppl_1):S37-S43. doi: 10.1093/infdis/jiw465. J Infect Dis. 2017. PMID: 28375518 Free PMC article.

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