Edwards RA - Search Results

1

SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data.

Silva GG, Green KT, Dutilh BE, Edwards RA. Silva GG, et al. Among authors: edwards ra. Bioinformatics. 2016 Feb 1;32(3):354-61. doi: 10.1093/bioinformatics/btv584. Epub 2015 Oct 9. Bioinformatics. 2016. PMID: 26454280 Free PMC article.

2

Accessing the SEED genome databases via Web services API: tools for programmers.

Disz T, Akhter S, Cuevas D, Olson R, Overbeek R, Vonstein V, Stevens R, Edwards RA. Disz T, et al. Among authors: edwards ra. BMC Bioinformatics. 2010 Jun 14;11:319. doi: 10.1186/1471-2105-11-319. BMC Bioinformatics. 2010. PMID: 20546611 Free PMC article.

3

TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets.

Schmieder R, Lim YW, Rohwer F, Edwards R. Schmieder R, et al. BMC Bioinformatics. 2010 Jun 23;11:341. doi: 10.1186/1471-2105-11-341. BMC Bioinformatics. 2010. PMID: 20573248 Free PMC article.

4

Quality control and preprocessing of metagenomic datasets.

Schmieder R, Edwards R. Schmieder R, et al. Bioinformatics. 2011 Mar 15;27(6):863-4. doi: 10.1093/bioinformatics/btr026. Epub 2011 Jan 28. Bioinformatics. 2011. PMID: 21278185 Free PMC article.

5

Genome sequence of the human pathogen Vibrio cholerae Amazonia.

Thompson CC, Marin MA, Dias GM, Dutilh BE, Edwards RA, Iida T, Thompson FL, Vicente AC. Thompson CC, et al. Among authors: edwards ra. J Bacteriol. 2011 Oct;193(20):5877-8. doi: 10.1128/JB.05643-11. J Bacteriol. 2011. PMID: 21952545 Free PMC article.

6

Identification and removal of ribosomal RNA sequences from metatranscriptomes.

Schmieder R, Lim YW, Edwards R. Schmieder R, et al. Bioinformatics. 2012 Feb 1;28(3):433-5. doi: 10.1093/bioinformatics/btr669. Epub 2011 Dec 6. Bioinformatics. 2012. PMID: 22155869 Free PMC article.

7

PHACTS, a computational approach to classifying the lifestyle of phages.

McNair K, Bailey BA, Edwards RA. McNair K, et al. Among authors: edwards ra. Bioinformatics. 2012 Mar 1;28(5):614-8. doi: 10.1093/bioinformatics/bts014. Epub 2012 Jan 11. Bioinformatics. 2012. PMID: 22238260 Free PMC article.

8

Genome sequences of the ethanol-tolerant Lactobacillus vini strains LMG 23202T and JP7.8.9.

Luckwu de Lucena BT, Silva GG, Manoel Dos Santos B, Dias GM, Amaral GR, Moreira AP, de Morais Júnior MA, Dutilh BE, Edwards RA, Balbino V, Thompson CC, Thompson FL. Luckwu de Lucena BT, et al. Among authors: edwards ra. J Bacteriol. 2012 Jun;194(11):3018. doi: 10.1128/JB.00446-12. J Bacteriol. 2012. PMID: 22582376 Free PMC article.

9

Genome-wide study of the defective sucrose fermenter strain of Vibrio cholerae from the Latin American cholera epidemic.

Garza DR, Thompson CC, Loureiro EC, Dutilh BE, Inada DT, Junior EC, Cardoso JF, Nunes MR, de Lima CP, Silvestre RV, Nunes KN, Santos EC, Edwards RA, Vicente AC, de Sá Morais LL. Garza DR, et al. Among authors: edwards ra. PLoS One. 2012;7(5):e37283. doi: 10.1371/journal.pone.0037283. Epub 2012 May 25. PLoS One. 2012. PMID: 22662140 Free PMC article.

10

Taxonomic and functional microbial signatures of the endemic marine sponge Arenosclera brasiliensis.

Trindade-Silva AE, Rua C, Silva GG, Dutilh BE, Moreira AP, Edwards RA, Hajdu E, Lobo-Hajdu G, Vasconcelos AT, Berlinck RG, Thompson FL. Trindade-Silva AE, et al. Among authors: edwards ra. PLoS One. 2012;7(7):e39905. doi: 10.1371/journal.pone.0039905. Epub 2012 Jul 2. PLoS One. 2012. PMID: 22768320 Free PMC article.

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