Xue Y - Search Results

1

Engineering a therapeutic lectin by uncoupling mitogenicity from antiviral activity.

Swanson MD, Boudreaux DM, Salmon L, Chugh J, Winter HC, Meagher JL, André S, Murphy PV, Oscarson S, Roy R, King S, Kaplan MH, Goldstein IJ, Tarbet EB, Hurst BL, Smee DF, de la Fuente C, Hoffmann HH, Xue Y, Rice CM, Schols D, Garcia JV, Stuckey JA, Gabius HJ, Al-Hashimi HM, Markovitz DM. Swanson MD, et al. Among authors: xue y. Cell. 2015 Oct 22;163(3):746-58. doi: 10.1016/j.cell.2015.09.056. Epub 2015 Oct 22. Cell. 2015. PMID: 26496612 Free PMC article.

2

Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.

Ren A, Xue Y, Peselis A, Serganov A, Al-Hashimi HM, Patel DJ. Ren A, et al. Among authors: xue y. Cell Rep. 2015 Dec 1;13(9):1800-13. doi: 10.1016/j.celrep.2015.10.062. Epub 2015 Nov 19. Cell Rep. 2015. PMID: 26655897 Free PMC article.

3

Characterizing RNA Excited States Using NMR Relaxation Dispersion.

Xue Y, Kellogg D, Kimsey IJ, Sathyamoorthy B, Stein ZW, McBrairty M, Al-Hashimi HM. Xue Y, et al. Methods Enzymol. 2015;558:39-73. doi: 10.1016/bs.mie.2015.02.002. Epub 2015 Mar 25. Methods Enzymol. 2015. PMID: 26068737 Free PMC article.

4

Rapid Exchange Between Free and Bound States in RNA-Dendrimer Polyplexes: Implications on the Mechanism of Delivery and Release.

Shakya A, Dougherty CA, Xue Y, Al-Hashimi HM, Banaszak Holl MM. Shakya A, et al. Among authors: xue y. Biomacromolecules. 2016 Jan 11;17(1):154-64. doi: 10.1021/acs.biomac.5b01280. Epub 2015 Dec 11. Biomacromolecules. 2016. PMID: 26595195 Free PMC article.

5

Shortening the HIV-1 TAR RNA Bulge by a Single Nucleotide Preserves Motional Modes over a Broad Range of Time Scales.

Merriman DK, Xue Y, Yang S, Kimsey IJ, Shakya A, Clay M, Al-Hashimi HM. Merriman DK, et al. Among authors: xue y. Biochemistry. 2016 Aug 16;55(32):4445-56. doi: 10.1021/acs.biochem.6b00285. Epub 2016 Aug 4. Biochemistry. 2016. PMID: 27232530 Free PMC article.

6

Visualizing the formation of an RNA folding intermediate through a fast highly modular secondary structure switch.

Xue Y, Gracia B, Herschlag D, Russell R, Al-Hashimi HM. Xue Y, et al. Nat Commun. 2016 Jun 13;7:ncomms11768. doi: 10.1038/ncomms11768. Nat Commun. 2016. PMID: 27292179 Free PMC article.

7

RNA Structural Modules Control the Rate and Pathway of RNA Folding and Assembly.

Gracia B, Xue Y, Bisaria N, Herschlag D, Al-Hashimi HM, Russell R. Gracia B, et al. Among authors: xue y. J Mol Biol. 2016 Oct 9;428(20):3972-3985. doi: 10.1016/j.jmb.2016.07.013. Epub 2016 Jul 22. J Mol Biol. 2016. PMID: 27452365 Free PMC article.

8

Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.

Sathyamoorthy B, Shi H, Zhou H, Xue Y, Rangadurai A, Merriman DK, Al-Hashimi HM. Sathyamoorthy B, et al. Among authors: xue y. Nucleic Acids Res. 2017 May 19;45(9):5586-5601. doi: 10.1093/nar/gkx186. Nucleic Acids Res. 2017. PMID: 28369571 Free PMC article.

9

Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically ¹³C- and ¹⁵N-Labeled DNA.

Zhou H, Sathyamoorthy B, Stelling A, Xu Y, Xue Y, Pigli YZ, Case DA, Rice PA, Al-Hashimi HM. Zhou H, et al. Among authors: xue y. Biochemistry. 2019 Apr 16;58(15):1963-1974. doi: 10.1021/acs.biochem.9b00027. Epub 2019 Apr 5. Biochemistry. 2019. PMID: 30950607 Free PMC article.

10

Dynamic basis for dG•dT misincorporation via tautomerization and ionization.

Kimsey IJ, Szymanski ES, Zahurancik WJ, Shakya A, Xue Y, Chu CC, Sathyamoorthy B, Suo Z, Al-Hashimi HM. Kimsey IJ, et al. Among authors: xue y. Nature. 2018 Feb 8;554(7691):195-201. doi: 10.1038/nature25487. Epub 2018 Jan 31. Nature. 2018. PMID: 29420478 Free PMC article.

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