Gautheret D - Search Results

1

A Dual Model for Prioritizing Cancer Mutations in the Non-coding Genome Based on Germline and Somatic Events.

Li J, Poursat MA, Drubay D, Motz A, Saci Z, Morillon A, Michiels S, Gautheret D. Li J, et al. Among authors: gautheret d. PLoS Comput Biol. 2015 Nov 20;11(11):e1004583. doi: 10.1371/journal.pcbi.1004583. eCollection 2015 Nov. PLoS Comput Biol. 2015. PMID: 26588488 Free PMC article.

2

Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles.

Marchais A, Naville M, Bohn C, Bouloc P, Gautheret D. Marchais A, et al. Among authors: gautheret d. Genome Res. 2009 Jun;19(6):1084-92. doi: 10.1101/gr.089714.108. Epub 2009 Feb 23. Genome Res. 2009. PMID: 19237465 Free PMC article.

3

RsaOG, a new staphylococcal family of highly transcribed non-coding RNA.

Marchais A, Bohn C, Bouloc P, Gautheret D. Marchais A, et al. Among authors: gautheret d. RNA Biol. 2010 Mar-Apr;7(2):116-9. doi: 10.4161/rna.7.2.10925. Epub 2010 Mar 9. RNA Biol. 2010. PMID: 20200491 Free article.

4

Plant noncoding RNA gene discovery by "single-genome comparative genomics".

Chen CJ, Zhou H, Chen YQ, Qu LH, Gautheret D. Chen CJ, et al. Among authors: gautheret d. RNA. 2011 Mar;17(3):390-400. doi: 10.1261/rna.2426511. Epub 2011 Jan 10. RNA. 2011. PMID: 21220549 Free PMC article.

5

Zinc-mediated RNA fragmentation allows robust transcript reassembly upon whole transcriptome RNA-Seq.

Wery M, Descrimes M, Thermes C, Gautheret D, Morillon A. Wery M, et al. Among authors: gautheret d. Methods. 2013 Sep 1;63(1):25-31. doi: 10.1016/j.ymeth.2013.03.009. Epub 2013 Mar 21. Methods. 2013. PMID: 23523657

6

Detection of non-coding RNA in bacteria and archaea using the DETR'PROK Galaxy pipeline.

Toffano-Nioche C, Luo Y, Kuchly C, Wallon C, Steinbach D, Zytnicki M, Jacq A, Gautheret D. Toffano-Nioche C, et al. Among authors: gautheret d. Methods. 2013 Sep 1;63(1):60-5. doi: 10.1016/j.ymeth.2013.06.003. Epub 2013 Jun 25. Methods. 2013. PMID: 23806640 Free article.

7

VING: a software for visualization of deep sequencing signals.

Descrimes M, Ben Zouari Y, Wery M, Legendre R, Gautheret D, Morillon A. Descrimes M, et al. Among authors: gautheret d. BMC Res Notes. 2015 Sep 7;8:419. doi: 10.1186/s13104-015-1404-5. BMC Res Notes. 2015. PMID: 26346985 Free PMC article.

8

Mining the coding and non-coding genome for cancer drivers.

Li J, Drubay D, Michiels S, Gautheret D. Li J, et al. Among authors: gautheret d. Cancer Lett. 2015 Dec 28;369(2):307-15. doi: 10.1016/j.canlet.2015.09.015. Epub 2015 Oct 1. Cancer Lett. 2015. PMID: 26433158 Review.

9

Nonsense-Mediated Decay Restricts LncRNA Levels in Yeast Unless Blocked by Double-Stranded RNA Structure.

Wery M, Descrimes M, Vogt N, Dallongeville AS, Gautheret D, Morillon A. Wery M, et al. Among authors: gautheret d. Mol Cell. 2016 Feb 4;61(3):379-392. doi: 10.1016/j.molcel.2015.12.020. Epub 2016 Jan 21. Mol Cell. 2016. PMID: 26805575 Free PMC article.

10

Native elongating transcript sequencing reveals global anti-correlation between sense and antisense nascent transcription in fission yeast.

Wery M, Gautier C, Descrimes M, Yoda M, Vennin-Rendos H, Migeot V, Gautheret D, Hermand D, Morillon A. Wery M, et al. Among authors: gautheret d. RNA. 2018 Feb;24(2):196-208. doi: 10.1261/rna.063446.117. Epub 2017 Nov 7. RNA. 2018. PMID: 29114019 Free PMC article.

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