Yang P - Search Results

1

KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis.

Yang P, Patrick E, Humphrey SJ, Ghazanfar S, James DE, Jothi R, Yang JY. Yang P, et al. Among authors: yang jy. Proteomics. 2016 Jul;16(13):1868-71. doi: 10.1002/pmic.201600068. Epub 2016 May 27. Proteomics. 2016. PMID: 27145998 Free PMC article.

2

A dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry data.

Wang P, Yang P, Arthur J, Yang JY. Wang P, et al. Among authors: yang p, yang jy. Bioinformatics. 2010 Sep 15;26(18):2242-9. doi: 10.1093/bioinformatics/btq403. Epub 2010 Jul 13. Bioinformatics. 2010. PMID: 20628072

3

Re-fraction: a machine learning approach for deterministic identification of protein homologues and splice variants in large-scale MS-based proteomics.

Yang P, Humphrey SJ, Fazakerley DJ, Prior MJ, Yang G, James DE, Yang JY. Yang P, et al. Among authors: yang jy, yang g. J Proteome Res. 2012 May 4;11(5):3035-45. doi: 10.1021/pr300072j. Epub 2012 Mar 30. J Proteome Res. 2012. PMID: 22428558

4

OCAP: an open comprehensive analysis pipeline for iTRAQ.

Wang P, Yang P, Yang JY. Wang P, et al. Among authors: yang p, yang jy. Bioinformatics. 2012 May 15;28(10):1404-5. doi: 10.1093/bioinformatics/bts150. Epub 2012 Mar 29. Bioinformatics. 2012. PMID: 22467906

5

Dynamic adipocyte phosphoproteome reveals that Akt directly regulates mTORC2.

Humphrey SJ, Yang G, Yang P, Fazakerley DJ, Stöckli J, Yang JY, James DE. Humphrey SJ, et al. Among authors: yang p, yang jy, yang g. Cell Metab. 2013 Jun 4;17(6):1009-1020. doi: 10.1016/j.cmet.2013.04.010. Epub 2013 May 16. Cell Metab. 2013. PMID: 23684622 Free PMC article.

6

Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway.

Yang P, Patrick E, Tan SX, Fazakerley DJ, Burchfield J, Gribben C, Prior MJ, James DE, Hwa Yang Y. Yang P, et al. Bioinformatics. 2014 Mar 15;30(6):808-14. doi: 10.1093/bioinformatics/btt616. Epub 2013 Oct 27. Bioinformatics. 2014. PMID: 24167158 Free PMC article.

7

Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal.

Lackford B, Yao C, Charles GM, Weng L, Zheng X, Choi EA, Xie X, Wan J, Xing Y, Freudenberg JM, Yang P, Jothi R, Hu G, Shi Y. Lackford B, et al. Among authors: yang p. EMBO J. 2014 Apr 16;33(8):878-89. doi: 10.1002/embj.201386537. Epub 2014 Mar 4. EMBO J. 2014. PMID: 24596251 Free PMC article.

8

ISL1 regulates peroxisome proliferator-activated receptor γ activation and early adipogenesis via bone morphogenetic protein 4-dependent and -independent mechanisms.

Ma X, Yang P, Kaplan WH, Lee BH, Wu LE, Yang JY, Yasunaga M, Sato K, Chisholm DJ, James DE. Ma X, et al. Among authors: yang p, yang jy. Mol Cell Biol. 2014 Oct 1;34(19):3607-17. doi: 10.1128/MCB.00583-14. Epub 2014 Jul 21. Mol Cell Biol. 2014. PMID: 25047837 Free PMC article.

9

Histone-fold domain protein NF-Y promotes chromatin accessibility for cell type-specific master transcription factors.

Oldfield AJ, Yang P, Conway AE, Cinghu S, Freudenberg JM, Yellaboina S, Jothi R. Oldfield AJ, et al. Among authors: yang p. Mol Cell. 2014 Sep 4;55(5):708-22. doi: 10.1016/j.molcel.2014.07.005. Epub 2014 Aug 14. Mol Cell. 2014. PMID: 25132174 Free PMC article.

10

DNMT1 is essential for mammary and cancer stem cell maintenance and tumorigenesis.

Pathania R, Ramachandran S, Elangovan S, Padia R, Yang P, Cinghu S, Veeranan-Karmegam R, Arjunan P, Gnana-Prakasam JP, Sadanand F, Pei L, Chang CS, Choi JH, Shi H, Manicassamy S, Prasad PD, Sharma S, Ganapathy V, Jothi R, Thangaraju M. Pathania R, et al. Among authors: yang p. Nat Commun. 2015 Apr 24;6:6910. doi: 10.1038/ncomms7910. Nat Commun. 2015. PMID: 25908435 Free PMC article.

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