Magarvey NA - Search Results

1

Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining.

Skinnider MA, Johnston CW, Edgar RE, Dejong CA, Merwin NJ, Rees PN, Magarvey NA. Skinnider MA, et al. Among authors: magarvey na. Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):E6343-E6351. doi: 10.1073/pnas.1609014113. Epub 2016 Oct 3. Proc Natl Acad Sci U S A. 2016. PMID: 27698135 Free PMC article.

2

Automated identification of depsipeptide natural products by an informatic search algorithm.

Skinnider MA, Johnston CW, Zvanych R, Magarvey NA. Skinnider MA, et al. Among authors: magarvey na. Chembiochem. 2015 Jan 19;16(2):223-7. doi: 10.1002/cbic.201402434. Epub 2014 Dec 8. Chembiochem. 2015. PMID: 25487354

3

Exploration of Nonribosomal Peptide Families with an Automated Informatic Search Algorithm.

Yang L, Ibrahim A, Johnston CW, Skinnider MA, Ma B, Magarvey NA. Yang L, et al. Among authors: magarvey na. Chem Biol. 2015 Sep 17;22(9):1259-69. doi: 10.1016/j.chembiol.2015.08.008. Epub 2015 Sep 10. Chem Biol. 2015. PMID: 26364933

4

Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM).

Skinnider MA, Dejong CA, Rees PN, Johnston CW, Li H, Webster AL, Wyatt MA, Magarvey NA. Skinnider MA, et al. Among authors: magarvey na. Nucleic Acids Res. 2015 Nov 16;43(20):9645-62. doi: 10.1093/nar/gkv1012. Epub 2015 Oct 5. Nucleic Acids Res. 2015. PMID: 26442528 Free PMC article.

5

Assembly and clustering of natural antibiotics guides target identification.

Johnston CW, Skinnider MA, Dejong CA, Rees PN, Chen GM, Walker CG, French S, Brown ED, Bérdy J, Liu DY, Magarvey NA. Johnston CW, et al. Among authors: magarvey na. Nat Chem Biol. 2016 Apr;12(4):233-9. doi: 10.1038/nchembio.2018. Epub 2016 Feb 1. Nat Chem Biol. 2016. PMID: 26829473

6

PRISM 3: expanded prediction of natural product chemical structures from microbial genomes.

Skinnider MA, Merwin NJ, Johnston CW, Magarvey NA. Skinnider MA, et al. Among authors: magarvey na. Nucleic Acids Res. 2017 Jul 3;45(W1):W49-W54. doi: 10.1093/nar/gkx320. Nucleic Acids Res. 2017. PMID: 28460067 Free PMC article.

7

Statistical reanalysis of natural products reveals increasing chemical diversity.

Skinnider MA, Magarvey NA. Skinnider MA, et al. Among authors: magarvey na. Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):E6271-E6272. doi: 10.1073/pnas.1708560114. Epub 2017 Jul 14. Proc Natl Acad Sci U S A. 2017. PMID: 28710332 Free PMC article. No abstract available.

8

Global analysis of prokaryotic tRNA-derived cyclodipeptide biosynthesis.

Skinnider MA, Johnston CW, Merwin NJ, Dejong CA, Magarvey NA. Skinnider MA, et al. Among authors: magarvey na. BMC Genomics. 2018 Jan 15;19(1):45. doi: 10.1186/s12864-018-4435-1. BMC Genomics. 2018. PMID: 29334896 Free PMC article.

9

DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products.

Merwin NJ, Mousa WK, Dejong CA, Skinnider MA, Cannon MJ, Li H, Dial K, Gunabalasingam M, Johnston C, Magarvey NA. Merwin NJ, et al. Among authors: magarvey na. Proc Natl Acad Sci U S A. 2020 Jan 7;117(1):371-380. doi: 10.1073/pnas.1901493116. Epub 2019 Dec 23. Proc Natl Acad Sci U S A. 2020. PMID: 31871149 Free PMC article.

10

Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery.

Ibrahim A, Yang L, Johnston C, Liu X, Ma B, Magarvey NA. Ibrahim A, et al. Among authors: magarvey na. Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19196-201. doi: 10.1073/pnas.1206376109. Epub 2012 Nov 6. Proc Natl Acad Sci U S A. 2012. PMID: 23132949 Free PMC article.

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