Palsson BO - Search Results

1

Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis.

Broddrick JT, Rubin BE, Welkie DG, Du N, Mih N, Diamond S, Lee JJ, Golden SS, Palsson BO. Broddrick JT, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2016 Dec 20;113(51):E8344-E8353. doi: 10.1073/pnas.1613446113. Epub 2016 Dec 1. Proc Natl Acad Sci U S A. 2016. PMID: 27911809 Free PMC article.

2

The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities.

Edwards JS, Palsson BO. Edwards JS, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2000 May 9;97(10):5528-33. doi: 10.1073/pnas.97.10.5528. Proc Natl Acad Sci U S A. 2000. PMID: 10805808 Free PMC article.

3

Genome-scale metabolic model of Helicobacter pylori 26695.

Schilling CH, Covert MW, Famili I, Church GM, Edwards JS, Palsson BO. Schilling CH, et al. Among authors: palsson bo. J Bacteriol. 2002 Aug;184(16):4582-93. doi: 10.1128/JB.184.16.4582-4593.2002. J Bacteriol. 2002. PMID: 12142428 Free PMC article.

4

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR).

Reed JL, Vo TD, Schilling CH, Palsson BO. Reed JL, et al. Among authors: palsson bo. Genome Biol. 2003;4(9):R54. doi: 10.1186/gb-2003-4-9-r54. Epub 2003 Aug 28. Genome Biol. 2003. PMID: 12952533 Free PMC article.

5

Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network.

Famili I, Forster J, Nielsen J, Palsson BO. Famili I, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13134-9. doi: 10.1073/pnas.2235812100. Epub 2003 Oct 24. Proc Natl Acad Sci U S A. 2003. PMID: 14578455 Free PMC article.

6

The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.

Barrett CL, Herring CD, Reed JL, Palsson BO. Barrett CL, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):19103-8. doi: 10.1073/pnas.0505231102. Epub 2005 Dec 15. Proc Natl Acad Sci U S A. 2005. PMID: 16357206 Free PMC article.

7

Systems approach to refining genome annotation.

Reed JL, Patel TR, Chen KH, Joyce AR, Applebee MK, Herring CD, Bui OT, Knight EM, Fong SS, Palsson BO. Reed JL, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2006 Nov 14;103(46):17480-4. doi: 10.1073/pnas.0603364103. Epub 2006 Nov 6. Proc Natl Acad Sci U S A. 2006. PMID: 17088549 Free PMC article.

8

Global reconstruction of the human metabolic network based on genomic and bibliomic data.

Duarte NC, Becker SA, Jamshidi N, Thiele I, Mo ML, Vo TD, Srivas R, Palsson BØ. Duarte NC, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2007 Feb 6;104(6):1777-82. doi: 10.1073/pnas.0610772104. Epub 2007 Jan 31. Proc Natl Acad Sci U S A. 2007. PMID: 17267599 Free PMC article.

9

Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli.

Cho BK, Barrett CL, Knight EM, Park YS, Palsson BØ. Cho BK, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2008 Dec 9;105(49):19462-7. doi: 10.1073/pnas.0807227105. Epub 2008 Dec 3. Proc Natl Acad Sci U S A. 2008. PMID: 19052235 Free PMC article.

10

A protocol for generating a high-quality genome-scale metabolic reconstruction.

Thiele I, Palsson BØ. Thiele I, et al. Among authors: palsson bo. Nat Protoc. 2010 Jan;5(1):93-121. doi: 10.1038/nprot.2009.203. Epub 2010 Jan 7. Nat Protoc. 2010. PMID: 20057383 Free PMC article.

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