Gilad Y - Search Results

1

Batch effects and the effective design of single-cell gene expression studies.

Tung PY, Blischak JD, Hsiao CJ, Knowles DA, Burnett JE, Pritchard JK, Gilad Y. Tung PY, et al. Among authors: gilad y. Sci Rep. 2017 Jan 3;7:39921. doi: 10.1038/srep39921. Sci Rep. 2017. PMID: 28045081 Free PMC article.

2

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays.

Marioni JC, Mason CE, Mane SM, Stephens M, Gilad Y. Marioni JC, et al. Among authors: gilad y. Genome Res. 2008 Sep;18(9):1509-17. doi: 10.1101/gr.079558.108. Epub 2008 Jun 11. Genome Res. 2008. PMID: 18550803 Free PMC article.

3

Revealing the architecture of gene regulation: the promise of eQTL studies.

Gilad Y, Rifkin SA, Pritchard JK. Gilad Y, et al. Trends Genet. 2008 Aug;24(8):408-15. doi: 10.1016/j.tig.2008.06.001. Epub 2008 Jul 1. Trends Genet. 2008. PMID: 18597885 Free PMC article. Review.

4

High-resolution mapping of expression-QTLs yields insight into human gene regulation.

Veyrieras JB, Kudaravalli S, Kim SY, Dermitzakis ET, Gilad Y, Stephens M, Pritchard JK. Veyrieras JB, et al. Among authors: gilad y. PLoS Genet. 2008 Oct;4(10):e1000214. doi: 10.1371/journal.pgen.1000214. Epub 2008 Oct 10. PLoS Genet. 2008. PMID: 18846210 Free PMC article.

5

Characterizing natural variation using next-generation sequencing technologies.

Gilad Y, Pritchard JK, Thornton K. Gilad Y, et al. Trends Genet. 2009 Oct;25(10):463-71. doi: 10.1016/j.tig.2009.09.003. Epub 2009 Oct 2. Trends Genet. 2009. PMID: 19801172 Free PMC article. Review.

6

Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.

Degner JF, Marioni JC, Pai AA, Pickrell JK, Nkadori E, Gilad Y, Pritchard JK. Degner JF, et al. Among authors: gilad y. Bioinformatics. 2009 Dec 15;25(24):3207-12. doi: 10.1093/bioinformatics/btp579. Epub 2009 Oct 6. Bioinformatics. 2009. PMID: 19808877 Free PMC article.

7

Understanding mechanisms underlying human gene expression variation with RNA sequencing.

Pickrell JK, Marioni JC, Pai AA, Degner JF, Engelhardt BE, Nkadori E, Veyrieras JB, Stephens M, Gilad Y, Pritchard JK. Pickrell JK, et al. Among authors: gilad y. Nature. 2010 Apr 1;464(7289):768-72. doi: 10.1038/nature08872. Epub 2010 Mar 10. Nature. 2010. PMID: 20220758 Free PMC article.

8

Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data.

Pique-Regi R, Degner JF, Pai AA, Gaffney DJ, Gilad Y, Pritchard JK. Pique-Regi R, et al. Among authors: gilad y. Genome Res. 2011 Mar;21(3):447-55. doi: 10.1101/gr.112623.110. Epub 2010 Nov 24. Genome Res. 2011. PMID: 21106904 Free PMC article.

9

Noisy splicing drives mRNA isoform diversity in human cells.

Pickrell JK, Pai AA, Gilad Y, Pritchard JK. Pickrell JK, et al. Among authors: gilad y. PLoS Genet. 2010 Dec 9;6(12):e1001236. doi: 10.1371/journal.pgen.1001236. PLoS Genet. 2010. PMID: 21151575 Free PMC article.

10

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.

Bell JT, Pai AA, Pickrell JK, Gaffney DJ, Pique-Regi R, Degner JF, Gilad Y, Pritchard JK. Bell JT, et al. Among authors: gilad y. Genome Biol. 2011;12(1):R10. doi: 10.1186/gb-2011-12-1-r10. Epub 2011 Jan 20. Genome Biol. 2011. PMID: 21251332 Free PMC article.

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