Kreisberg JF - Search Results

1

Interaction Landscape of Inherited Polymorphisms with Somatic Events in Cancer.

Carter H, Marty R, Hofree M, Gross AM, Jensen J, Fisch KM, Wu X, DeBoever C, Van Nostrand EL, Song Y, Wheeler E, Kreisberg JF, Lippman SM, Yeo GW, Gutkind JS, Ideker T. Carter H, et al. Among authors: kreisberg jf. Cancer Discov. 2017 Apr;7(4):410-423. doi: 10.1158/2159-8290.CD-16-1045. Epub 2017 Feb 10. Cancer Discov. 2017. PMID: 28188128 Free PMC article.

2

Analysis of Matched Tumor and Normal Profiles Reveals Common Transcriptional and Epigenetic Signals Shared across Cancer Types.

Gross AM, Kreisberg JF, Ideker T. Gross AM, et al. Among authors: kreisberg jf. PLoS One. 2015 Nov 10;10(11):e0142618. doi: 10.1371/journal.pone.0142618. eCollection 2015. PLoS One. 2015. PMID: 26555223 Free PMC article.

3

Evidence for a common evolutionary rate in metazoan transcriptional networks.

Carvunis AR, Wang T, Skola D, Yu A, Chen J, Kreisberg JF, Ideker T. Carvunis AR, et al. Among authors: kreisberg jf. Elife. 2015 Dec 18;4:e11615. doi: 10.7554/eLife.11615. Elife. 2015. PMID: 26682651 Free PMC article.

4

Translation of Genotype to Phenotype by a Hierarchy of Cell Subsystems.

Yu MK, Kramer M, Dutkowski J, Srivas R, Licon K, Kreisberg J, Ng CT, Krogan N, Sharan R, Ideker T. Yu MK, et al. Cell Syst. 2016 Feb 24;2(2):77-88. doi: 10.1016/j.cels.2016.02.003. Cell Syst. 2016. PMID: 26949740 Free PMC article.

5

Structure-Based Analysis Reveals Cancer Missense Mutations Target Protein Interaction Interfaces.

Engin HB, Kreisberg JF, Carter H. Engin HB, et al. Among authors: kreisberg jf. PLoS One. 2016 Apr 4;11(4):e0152929. doi: 10.1371/journal.pone.0152929. eCollection 2016. PLoS One. 2016. PMID: 27043210 Free PMC article.

6

Methylome-wide Analysis of Chronic HIV Infection Reveals Five-Year Increase in Biological Age and Epigenetic Targeting of HLA.

Gross AM, Jaeger PA, Kreisberg JF, Licon K, Jepsen KL, Khosroheidari M, Morsey BM, Swindells S, Shen H, Ng CT, Flagg K, Chen D, Zhang K, Fox HS, Ideker T. Gross AM, et al. Among authors: kreisberg jf. Mol Cell. 2016 Apr 21;62(2):157-168. doi: 10.1016/j.molcel.2016.03.019. Mol Cell. 2016. PMID: 27105112 Free PMC article.

7

Challenges in identifying cancer genes by analysis of exome sequencing data.

Hofree M, Carter H, Kreisberg JF, Bandyopadhyay S, Mischel PS, Friend S, Ideker T. Hofree M, et al. Among authors: kreisberg jf. Nat Commun. 2016 Jul 15;7:12096. doi: 10.1038/ncomms12096. Nat Commun. 2016. PMID: 27417679 Free PMC article.

8

Combinatorial CRISPR-Cas9 screens for de novo mapping of genetic interactions.

Shen JP, Zhao D, Sasik R, Luebeck J, Birmingham A, Bojorquez-Gomez A, Licon K, Klepper K, Pekin D, Beckett AN, Sanchez KS, Thomas A, Kuo CC, Du D, Roguev A, Lewis NE, Chang AN, Kreisberg JF, Krogan N, Qi L, Ideker T, Mali P. Shen JP, et al. Among authors: kreisberg jf. Nat Methods. 2017 Jun;14(6):573-576. doi: 10.1038/nmeth.4225. Epub 2017 Mar 20. Nat Methods. 2017. PMID: 28319113 Free PMC article.

9

Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment.

Wang T, Tsui B, Kreisberg JF, Robertson NA, Gross AM, Yu MK, Carter H, Brown-Borg HM, Adams PD, Ideker T. Wang T, et al. Among authors: kreisberg jf. Genome Biol. 2017 Mar 28;18(1):57. doi: 10.1186/s13059-017-1186-2. Genome Biol. 2017. PMID: 28351423 Free PMC article.

10

Systematic Evaluation of Molecular Networks for Discovery of Disease Genes.

Huang JK, Carlin DE, Yu MK, Zhang W, Kreisberg JF, Tamayo P, Ideker T. Huang JK, et al. Among authors: kreisberg jf. Cell Syst. 2018 Apr 25;6(4):484-495.e5. doi: 10.1016/j.cels.2018.03.001. Epub 2018 Mar 28. Cell Syst. 2018. PMID: 29605183 Free PMC article.

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