Varizhuk AM - Search Results

1

Synthesis of oligonucleotides containing novel G-clamp analogue with C8-tethered group in phenoxazine ring: Implication to qPCR detection of the low-copy Kemerovo virus dsRNA.

Varizhuk AM, Zatsepin TS, Golovin AV, Belyaev ES, Kostyukevich YI, Dedkov VG, Shipulin GA, Shpakovski GV, Aralov AV. Varizhuk AM, et al. Bioorg Med Chem. 2017 Jul 15;25(14):3597-3605. doi: 10.1016/j.bmc.2017.03.062. Epub 2017 Mar 31. Bioorg Med Chem. 2017. PMID: 28396019

2

Synthesis and hybridization data of oligonucleotide analogs with triazole internucleotide linkages, potential antiviral and antitumor agents.

Varizhuk A, Chizhov A, Florentiev V. Varizhuk A, et al. Bioorg Chem. 2011 Jun;39(3):127-31. doi: 10.1016/j.bioorg.2011.03.002. Epub 2011 Mar 15. Bioorg Chem. 2011. PMID: 21474159

3

Synthesis of triazole-linked oligonucleotides with high affinity to DNA complements and an analysis of their compatibility with biosystems.

Varizhuk AM, Kaluzhny DN, Novikov RA, Chizhov AO, Smirnov IP, Chuvilin AN, Tatarinova ON, Fisunov GY, Pozmogova GE, Florentiev VL. Varizhuk AM, et al. J Org Chem. 2013 Jun 21;78(12):5964-9. doi: 10.1021/jo400651k. Epub 2013 Jun 11. J Org Chem. 2013. PMID: 23724994

4

Synthesis, characterization and in vitro activity of thrombin-binding DNA aptamers with triazole internucleotide linkages.

Varizhuk AM, Tsvetkov VB, Tatarinova ON, Kaluzhny DN, Florentiev VL, Timofeev EN, Shchyolkina AK, Borisova OF, Smirnov IP, Grokhovsky SL, Aseychev AV, Pozmogova GE. Varizhuk AM, et al. Eur J Med Chem. 2013 Sep;67:90-7. doi: 10.1016/j.ejmech.2013.06.034. Epub 2013 Jun 25. Eur J Med Chem. 2013. PMID: 23850569

5

i-Clamp phenoxazine for the fine tuning of DNA i-motif stability.

Tsvetkov VB, Zatsepin TS, Belyaev ES, Kostyukevich YI, Shpakovski GV, Podgorsky VV, Pozmogova GE, Varizhuk AM, Aralov AV. Tsvetkov VB, et al. Among authors: varizhuk am. Nucleic Acids Res. 2018 Apr 6;46(6):2751-2764. doi: 10.1093/nar/gky121. Nucleic Acids Res. 2018. PMID: 29474573 Free PMC article.

6

Oligonucleotide Primers with G^8AE-Clamp Modifications for RT-qPCR Detection of the Low-Copy dsRNA.

Zatsepin TS, Varizhuk AM, Dedkov VG, Shipulin GA, Aralov AV. Zatsepin TS, et al. Among authors: varizhuk am. Methods Mol Biol. 2019;1973:281-297. doi: 10.1007/978-1-4939-9216-4_18. Methods Mol Biol. 2019. PMID: 31016709

7

Benzothiazole-based cyanines as fluorescent "light-up" probes for duplex and quadruplex DNA.

Turaev AV, Tsvetkov VB, Tankevich MV, Smirnov IP, Aralov AV, Pozmogova GE, Varizhuk AM. Turaev AV, et al. Among authors: varizhuk am. Biochimie. 2019 Jul;162:216-228. doi: 10.1016/j.biochi.2019.04.018. Epub 2019 Apr 22. Biochimie. 2019. PMID: 31022429

8

DNA i-Motifs With Guanidino-i-Clamp Residues: The Counterplay Between Kinetics and Thermodynamics and Implications for the Design of pH Sensors.

Tsvetkov VB, Zatsepin TS, Turaev AV, Farzan VM, Pozmogova GE, Aralov AV, Varizhuk AM. Tsvetkov VB, et al. Among authors: varizhuk am. Comput Struct Biotechnol J. 2019 Apr 13;17:527-536. doi: 10.1016/j.csbj.2019.04.006. eCollection 2019. Comput Struct Biotechnol J. 2019. PMID: 31049164 Free PMC article.

9

Short Duplex Module Coupled to G-Quadruplexes Increases Fluorescence of Synthetic GFP Chromophore Analogues.

Zaitseva SO, Baleeva NS, Zatsepin TS, Myasnyanko IN, Turaev AV, Pozmogova GE, Khrulev AA, Varizhuk AM, Baranov MS, Aralov AV. Zaitseva SO, et al. Among authors: varizhuk am. Sensors (Basel). 2020 Feb 9;20(3):915. doi: 10.3390/s20030915. Sensors (Basel). 2020. PMID: 32050425 Free PMC article.

10

Phenoxazine-based scaffold for designing G4-interacting agents.

Tsvetkov VB, Varizhuk AM, Lizunova SA, Nikolenko TA, Ivanov IA, Severov VV, Belyaev ES, Shitikov EA, Pozmogova GE, Aralov AV. Tsvetkov VB, et al. Among authors: varizhuk am. Org Biomol Chem. 2020 Aug 12;18(31):6147-6154. doi: 10.1039/d0ob00983k. Org Biomol Chem. 2020. PMID: 32719836

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