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Natural bacterial communities serve as quantitative geochemical biosensors.
Smith MB, Rocha AM, Smillie CS, Olesen SW, Paradis C, Wu L, Campbell JH, Fortney JL, Mehlhorn TL, Lowe KA, Earles JE, Phillips J, Techtmann SM, Joyner DC, Elias DA, Bailey KL, Hurt RA Jr, Preheim SP, Sanders MC, Yang J, Mueller MA, Brooks S, Watson DB, Zhang P, He Z, Dubinsky EA, Adams PD, Arkin AP, Fields MW, Zhou J, Alm EJ, Hazen TC. Smith MB, et al. Among authors: alm ej. mBio. 2015 May 12;6(3):e00326-15. doi: 10.1128/mBio.00326-15. mBio. 2015. PMID: 25968645 Free PMC article.
A Novel Analysis Method for Paired-Sample Microbial Ecology Experiments.
Olesen SW, Vora S, Techtmann SM, Fortney JL, Bastidas-Oyanedel JR, Rodríguez J, Hazen TC, Alm EJ. Olesen SW, et al. Among authors: alm ej. PLoS One. 2016 May 6;11(5):e0154804. doi: 10.1371/journal.pone.0154804. eCollection 2016. PLoS One. 2016. PMID: 27152415 Free PMC article.
Dysbiosis is not an answer.
Olesen SW, Alm EJ. Olesen SW, et al. Among authors: alm ej. Nat Microbiol. 2016 Nov 25;1:16228. doi: 10.1038/nmicrobiol.2016.228. Nat Microbiol. 2016. PMID: 27886190 No abstract available.
Salt-responsive gut commensal modulates TH17 axis and disease.
Wilck N, Matus MG, Kearney SM, Olesen SW, Forslund K, Bartolomaeus H, Haase S, Mähler A, Balogh A, Markó L, Vvedenskaya O, Kleiner FH, Tsvetkov D, Klug L, Costea PI, Sunagawa S, Maier L, Rakova N, Schatz V, Neubert P, Frätzer C, Krannich A, Gollasch M, Grohme DA, Côrte-Real BF, Gerlach RG, Basic M, Typas A, Wu C, Titze JM, Jantsch J, Boschmann M, Dechend R, Kleinewietfeld M, Kempa S, Bork P, Linker RA, Alm EJ, Müller DN. Wilck N, et al. Among authors: alm ej. Nature. 2017 Nov 30;551(7682):585-589. doi: 10.1038/nature24628. Epub 2017 Nov 15. Nature. 2017. PMID: 29143823 Free PMC article.
Correcting for batch effects in case-control microbiome studies.
Gibbons SM, Duvallet C, Alm EJ. Gibbons SM, et al. Among authors: alm ej. PLoS Comput Biol. 2018 Apr 23;14(4):e1006102. doi: 10.1371/journal.pcbi.1006102. eCollection 2018 Apr. PLoS Comput Biol. 2018. PMID: 29684016 Free PMC article.
197 results