Tan J - Search Results

1

A molecular beacon-based approach for live-cell imaging of RNA transcripts with minimal target engineering at the single-molecule level.

Chen M, Ma Z, Wu X, Mao S, Yang Y, Tan J, Krueger CJ, Chen AK. Chen M, et al. Among authors: tan j. Sci Rep. 2017 May 8;7(1):1550. doi: 10.1038/s41598-017-01740-1. Sci Rep. 2017. PMID: 28484218 Free PMC article.

2

Roles of Gag-RNA interactions in HIV-1 virus assembly deciphered by single-molecule localization microscopy.

Yang Y, Qu N, Tan J, Rushdi MN, Krueger CJ, Chen AK. Yang Y, et al. Among authors: tan j. Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6721-6726. doi: 10.1073/pnas.1805728115. Epub 2018 Jun 11. Proc Natl Acad Sci U S A. 2018. PMID: 29891653 Free PMC article.

3

Predicting hosts based on early SARS-CoV-2 samples and analyzing the 2020 pandemic.

Guo Q, Li M, Wang C, Guo J, Jiang X, Tan J, Wu S, Wang P, Xiao T, Zhou M, Fang Z, Xiao Y, Zhu H. Guo Q, et al. Among authors: tan j. Sci Rep. 2021 Aug 31;11(1):17422. doi: 10.1038/s41598-021-96903-6. Sci Rep. 2021. PMID: 34465838 Free PMC article.

4

DeePhage: distinguishing virulent and temperate phage-derived sequences in metavirome data with a deep learning approach.

Wu S, Fang Z, Tan J, Li M, Wang C, Guo Q, Xu C, Jiang X, Zhu H. Wu S, et al. Among authors: tan j. Gigascience. 2021 Sep 8;10(9):giab056. doi: 10.1093/gigascience/giab056. Gigascience. 2021. PMID: 34498685 Free PMC article.

5

PPR-Meta: a tool for identifying phages and plasmids from metagenomic fragments using deep learning.

Fang Z, Tan J, Wu S, Li M, Xu C, Xie Z, Zhu H. Fang Z, et al. Among authors: tan j. Gigascience. 2019 Jun 1;8(6):giz066. doi: 10.1093/gigascience/giz066. Gigascience. 2019. PMID: 31220250 Free PMC article.

6

IPEV: identification of prokaryotic and eukaryotic virus-derived sequences in virome using deep learning.

Yin H, Wu S, Tan J, Guo Q, Li M, Guo J, Wang Y, Jiang X, Zhu H. Yin H, et al. Among authors: tan j. Gigascience. 2024 Jan 2;13:giae018. doi: 10.1093/gigascience/giae018. Gigascience. 2024. PMID: 38649300 Free PMC article.

7

Global Meta-analysis of Airborne Bacterial Communities and Associations with Anthropogenic Activities.

Jiang X, Wang C, Guo J, Hou J, Guo X, Zhang H, Tan J, Li M, Li X, Zhu H. Jiang X, et al. Among authors: tan j. Environ Sci Technol. 2022 Jul 19;56(14):9891-9902. doi: 10.1021/acs.est.1c07923. Epub 2022 Jul 4. Environ Sci Technol. 2022. PMID: 35785964 Free PMC article.

8

More Positive or More Negative? Metagenomic Analysis Reveals Roles of Virome in Human Disease-Related Gut Microbiome.

Li M, Wang C, Guo Q, Xu C, Xie Z, Tan J, Wu S, Wang P, Guo J, Fang Z, Zhu S, Duan L, Jiang X, Zhu H. Li M, et al. Among authors: tan j. Front Cell Infect Microbiol. 2022 Apr 12;12:846063. doi: 10.3389/fcimb.2022.846063. eCollection 2022. Front Cell Infect Microbiol. 2022. PMID: 35493727 Free PMC article.

9

HoPhage: an ab initio tool for identifying hosts of phage fragments from metaviromes.

Tan J, Fang Z, Wu S, Guo Q, Jiang X, Zhu H. Tan J, et al. Bioinformatics. 2022 Jan 3;38(2):543-545. doi: 10.1093/bioinformatics/btab585. Bioinformatics. 2022. PMID: 34383025 Free PMC article.

10

PlasGUN: gene prediction in plasmid metagenomic short reads using deep learning.

Fang Z, Tan J, Wu S, Li M, Wang C, Liu Y, Zhu H. Fang Z, et al. Among authors: tan j. Bioinformatics. 2020 May 1;36(10):3239-3241. doi: 10.1093/bioinformatics/btaa103. Bioinformatics. 2020. PMID: 32091572 Free PMC article.

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