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Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.
Jongeneel CV, Achinike-Oduaran O, Adebiyi E, Adebiyi M, Adeyemi S, Akanle B, Aron S, Ashano E, Bendou H, Botha G, Chimusa E, Choudhury A, Donthu R, Drnevich J, Falola O, Fields CJ, Hazelhurst S, Hendry L, Isewon I, Khetani RS, Kumuthini J, Kimuda MP, Magosi L, Mainzer LS, Maslamoney S, Mbiyavanga M, Meintjes A, Mugutso D, Mpangase P, Munthali R, Nembaware V, Ndhlovu A, Odia T, Okafor A, Oladipo O, Panji S, Pillay V, Rendon G, Sengupta D, Mulder N. Jongeneel CV, et al. Among authors: khetani rs. PLoS Comput Biol. 2017 Jun 1;13(6):e1005419. doi: 10.1371/journal.pcbi.1005419. eCollection 2017 Jun. PLoS Comput Biol. 2017. PMID: 28570565 Free PMC article.
H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa.
Mulder NJ, Adebiyi E, Alami R, Benkahla A, Brandful J, Doumbia S, Everett D, Fadlelmola FM, Gaboun F, Gaseitsiwe S, Ghazal H, Hazelhurst S, Hide W, Ibrahimi A, Jaufeerally Fakim Y, Jongeneel CV, Joubert F, Kassim S, Kayondo J, Kumuthini J, Lyantagaye S, Makani J, Mansour Alzohairy A, Masiga D, Moussa A, Nash O, Ouwe Missi Oukem-Boyer O, Owusu-Dabo E, Panji S, Patterton H, Radouani F, Sadki K, Seghrouchni F, Tastan Bishop Ö, Tiffin N, Ulenga N; H3ABioNet Consortium. Mulder NJ, et al. Genome Res. 2016 Feb;26(2):271-7. doi: 10.1101/gr.196295.115. Epub 2015 Dec 1. Genome Res. 2016. PMID: 26627985 Free PMC article.
MOV10 and FMRP regulate AGO2 association with microRNA recognition elements.
Kenny PJ, Zhou H, Kim M, Skariah G, Khetani RS, Drnevich J, Arcila ML, Kosik KS, Ceman S. Kenny PJ, et al. Among authors: khetani rs. Cell Rep. 2014 Dec 11;9(5):1729-1741. doi: 10.1016/j.celrep.2014.10.054. Epub 2014 Nov 20. Cell Rep. 2014. PMID: 25464849 Free PMC article.
Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats.
Dong Y, Sanford RA, Inskeep WP, Srivastava V, Bulone V, Fields CJ, Yau PM, Sivaguru M, Ahrén D, Fouke KW, Weber J, Werth CR, Cann IK, Keating KM, Khetani RS, Hernandez AG, Wright C, Band M, Imai BS, Fried GA, Fouke BW. Dong Y, et al. Among authors: khetani rs. Astrobiology. 2019 Dec;19(12):1442-1458. doi: 10.1089/ast.2018.1965. Epub 2019 Apr 30. Astrobiology. 2019. PMID: 31038352 Free PMC article.
mBLAST: Keeping up with the sequencing explosion for (meta)genome analysis.
Davis C, Kota K, Baldhandapani V, Gong W, Abubucker S, Becker E, Martin J, Wylie KM, Khetani R, Hudson ME, Weinstock GM, Mitreva M. Davis C, et al. J Data Mining Genomics Proteomics. 2015 Aug;4(3):135. doi: 10.4172/2153-0602.1000135. Epub 2013 Jul 31. J Data Mining Genomics Proteomics. 2015. PMID: 26500804 Free PMC article.
Integrated Skin Transcriptomics and Serum Multiplex Assays Reveal Novel Mechanisms of Wound Healing in Diabetic Foot Ulcers.
Theocharidis G, Baltzis D, Roustit M, Tellechea A, Dangwal S, Khetani RS, Shu B, Zhao W, Fu J, Bhasin S, Kafanas A, Hui D, Sui SH, Patsopoulos NA, Bhasin M, Veves A. Theocharidis G, et al. Among authors: khetani rs. Diabetes. 2020 Oct;69(10):2157-2169. doi: 10.2337/db20-0188. Epub 2020 Aug 6. Diabetes. 2020. PMID: 32763913 Free PMC article.
22 results