Molania R - Search Results

1

Reducing Artifactual EGFR T790M Mutations in DNA from Formalin-Fixed Paraffin-Embedded Tissue by Use of Thymine-DNA Glycosylase.

Do H, Molania R, Mitchell PL, Vaiskunaite R, Murdoch JD, Dobrovic A. Do H, et al. Among authors: molania r. Clin Chem. 2017 Sep;63(9):1506-1514. doi: 10.1373/clinchem.2017.271932. Epub 2017 Jul 18. Clin Chem. 2017. PMID: 28720682

2

Digital PCR of Genomic Rearrangements for Monitoring Circulating Tumour DNA.

Do H, Cameron D, Molania R, Thapa B, Rivalland G, Mitchell PL, Murone C, John T, Papenfuss A, Dobrovic A. Do H, et al. Among authors: molania r. Adv Exp Med Biol. 2016;924:139-146. doi: 10.1007/978-3-319-42044-8_27. Adv Exp Med Biol. 2016. PMID: 27753035

3

GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly.

Cameron DL, Schröder J, Penington JS, Do H, Molania R, Dobrovic A, Speed TP, Papenfuss AT. Cameron DL, et al. Among authors: molania r. Genome Res. 2017 Dec;27(12):2050-2060. doi: 10.1101/gr.222109.117. Epub 2017 Nov 2. Genome Res. 2017. PMID: 29097403 Free PMC article.

4

A new normalization for Nanostring nCounter gene expression data.

Molania R, Gagnon-Bartsch JA, Dobrovic A, Speed TP. Molania R, et al. Nucleic Acids Res. 2019 Jul 9;47(12):6073-6083. doi: 10.1093/nar/gkz433. Nucleic Acids Res. 2019. PMID: 31114909 Free PMC article.

5

LRH-1 expression patterns in breast cancer tissues are associated with tumour aggressiveness.

Pang JB, Molania R, Chand A, Knower K, Takano EA, Byrne DJ, Mikeska T, Millar EKA, Lee CS, O'Toole SA, Clyne C, Gorringe KL, Dobrovic A, Fox SB. Pang JB, et al. Among authors: molania r. Oncotarget. 2017 Jul 28;8(48):83626-83636. doi: 10.18632/oncotarget.18886. eCollection 2017 Oct 13. Oncotarget. 2017. PMID: 29137369 Free PMC article.

6

Removing unwanted variation from large-scale RNA sequencing data with PRPS.

Molania R, Foroutan M, Gagnon-Bartsch JA, Gandolfo LC, Jain A, Sinha A, Olshansky G, Dobrovic A, Papenfuss AT, Speed TP. Molania R, et al. Nat Biotechnol. 2023 Jan;41(1):82-95. doi: 10.1038/s41587-022-01440-w. Epub 2022 Sep 15. Nat Biotechnol. 2023. PMID: 36109686 Free PMC article.

7

Transketolase-like 1 ectopic expression is associated with DNA hypomethylation and induces the Warburg effect in melanoma cells.

Jayachandran A, Lo PH, Chueh AC, Prithviraj P, Molania R, Davalos-Salas M, Anaka M, Walkiewicz M, Cebon J, Behren A. Jayachandran A, et al. Among authors: molania r. BMC Cancer. 2016 Feb 22;16:134. doi: 10.1186/s12885-016-2185-5. BMC Cancer. 2016. PMID: 26907172 Free PMC article.

8

tidybulk: an R tidy framework for modular transcriptomic data analysis.

Mangiola S, Molania R, Dong R, Doyle MA, Papenfuss AT. Mangiola S, et al. Among authors: molania r. Genome Biol. 2021 Jan 22;22(1):42. doi: 10.1186/s13059-020-02233-7. Genome Biol. 2021. PMID: 33482892 Free PMC article.

9

RUV-III-NB: normalization of single cell RNA-seq data.

Salim A, Molania R, Wang J, De Livera A, Thijssen R, Speed TP. Salim A, et al. Among authors: molania r. Nucleic Acids Res. 2022 Sep 9;50(16):e96. doi: 10.1093/nar/gkac486. Nucleic Acids Res. 2022. PMID: 35758618 Free PMC article.

10

The Ratio of Exhausted to Resident Infiltrating Lymphocytes Is Prognostic for Colorectal Cancer Patient Outcome.

Foroutan M, Molania R, Pfefferle A, Behrenbruch C, Scheer S, Kallies A, Speed TP, Cursons J, Huntington ND. Foroutan M, et al. Among authors: molania r. Cancer Immunol Res. 2021 Oct;9(10):1125-1140. doi: 10.1158/2326-6066.CIR-21-0137. Epub 2021 Aug 19. Cancer Immunol Res. 2021. PMID: 34413087

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