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Repliscan: a tool for classifying replication timing regions.
Zynda GJ, Song J, Concia L, Wear EE, Hanley-Bowdoin L, Thompson WF, Vaughn MW. Zynda GJ, et al. Among authors: concia l. BMC Bioinformatics. 2017 Aug 7;18(1):362. doi: 10.1186/s12859-017-1774-x. BMC Bioinformatics. 2017. PMID: 28784090 Free PMC article.
Genome-Wide Analysis of the Arabidopsis Replication Timing Program.
Concia L, Brooks AM, Wheeler E, Zynda GJ, Wear EE, LeBlanc C, Song J, Lee TJ, Pascuzzi PE, Martienssen RA, Vaughn MW, Thompson WF, Hanley-Bowdoin L. Concia L, et al. Plant Physiol. 2018 Mar;176(3):2166-2185. doi: 10.1104/pp.17.01537. Epub 2018 Jan 4. Plant Physiol. 2018. PMID: 29301956 Free PMC article.
Arabidopsis DNA Replication Initiates in Intergenic, AT-Rich Open Chromatin.
Wheeler E, Brooks AM, Concia L, Vera DL, Wear EE, LeBlanc C, Ramu U, Vaughn MW, Bass HW, Martienssen RA, Thompson WF, Hanley-Bowdoin L. Wheeler E, et al. Among authors: concia l. Plant Physiol. 2020 May;183(1):206-220. doi: 10.1104/pp.19.01520. Epub 2020 Mar 23. Plant Physiol. 2020. PMID: 32205451 Free PMC article.
Immunity onset alters plant chromatin and utilizes EDA16 to regulate oxidative homeostasis.
Pardal AJ, Piquerez SJM, Dominguez-Ferreras A, Frungillo L, Mastorakis E, Reilly E, Latrasse D, Concia L, Gimenez-Ibanez S, Spoel SH, Benhamed M, Ntoukakis V. Pardal AJ, et al. Among authors: concia l. PLoS Pathog. 2021 May 20;17(5):e1009572. doi: 10.1371/journal.ppat.1009572. eCollection 2021 May. PLoS Pathog. 2021. PMID: 34015058 Free PMC article.
Wheat chromatin architecture is organized in genome territories and transcription factories.
Concia L, Veluchamy A, Ramirez-Prado JS, Martin-Ramirez A, Huang Y, Perez M, Domenichini S, Rodriguez Granados NY, Kim S, Blein T, Duncan S, Pichot C, Manza-Mianza D, Juery C, Paux E, Moore G, Hirt H, Bergounioux C, Crespi M, Mahfouz MM, Bendahmane A, Liu C, Hall A, Raynaud C, Latrasse D, Benhamed M. Concia L, et al. Genome Biol. 2020 Apr 29;21(1):104. doi: 10.1186/s13059-020-01998-1. Genome Biol. 2020. PMID: 32349780 Free PMC article.
20 results