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Page 1
Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae.
Assis RAB, Polloni LC, Patané JSL, Thakur S, Felestrino ÉB, Diaz-Caballero J, Digiampietri LA, Goulart LR, Almeida NF, Nascimento R, Dandekar AM, Zaini PA, Setubal JC, Guttman DS, Moreira LM. Assis RAB, et al. Among authors: almeida nf. Sci Rep. 2017 Nov 23;7(1):16133. doi: 10.1038/s41598-017-16325-1. Sci Rep. 2017. PMID: 29170530 Free PMC article.
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.
da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El-Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA, Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos Santos M, Truffi D, Tsai SM, White FF, Setubal JC, Kitajima JP. da Silva AC, et al. Among authors: almeida nf. Nature. 2002 May 23;417(6887):459-63. doi: 10.1038/417459a. Nature. 2002. PMID: 12024217
Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.
Van Sluys MA, de Oliveira MC, Monteiro-Vitorello CB, Miyaki CY, Furlan LR, Camargo LE, da Silva AC, Moon DH, Takita MA, Lemos EG, Machado MA, Ferro MI, da Silva FR, Goldman MH, Goldman GH, Lemos MV, El-Dorry H, Tsai SM, Carrer H, Carraro DM, de Oliveira RC, Nunes LR, Siqueira WJ, Coutinho LL, Kimura ET, Ferro ES, Harakava R, Kuramae EE, Marino CL, Giglioti E, Abreu IL, Alves LM, do Amaral AM, Baia GS, Blanco SR, Brito MS, Cannavan FS, Celestino AV, da Cunha AF, Fenille RC, Ferro JA, Formighieri EF, Kishi LT, Leoni SG, Oliveira AR, Rosa VE Jr, Sassaki FT, Sena JA, de Souza AA, Truffi D, Tsukumo F, Yanai GM, Zaros LG, Civerolo EL, Simpson AJ, Almeida NF Jr, Setubal JC, Kitajima JP. Van Sluys MA, et al. Among authors: almeida nf jr. J Bacteriol. 2003 Feb;185(3):1018-26. doi: 10.1128/JB.185.3.1018-1026.2003. J Bacteriol. 2003. PMID: 12533478 Free PMC article.
Comparative genomics analyses of citrus-associated bacteria.
Moreira LM, de Souza RF, Almeida NF Jr, Setubal JC, Oliveira JC, Furlan LR, Ferro JA, da Silva AC. Moreira LM, et al. Among authors: almeida nf jr. Annu Rev Phytopathol. 2004;42:163-84. doi: 10.1146/annurev.phyto.42.040803.140310. Annu Rev Phytopathol. 2004. PMID: 15283664 Review.
The genome sequence of the gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli.
Monteiro-Vitorello CB, Camargo LE, Van Sluys MA, Kitajima JP, Truffi D, do Amaral AM, Harakava R, de Oliveira JC, Wood D, de Oliveira MC, Miyaki C, Takita MA, da Silva AC, Furlan LR, Carraro DM, Camarotte G, Almeida NF Jr, Carrer H, Coutinho LL, El-Dorry HA, Ferro MI, Gagliardi PR, Giglioti E, Goldman MH, Goldman GH, Kimura ET, Ferro ES, Kuramae EE, Lemos EG, Lemos MV, Mauro SM, Machado MA, Marino CL, Menck CF, Nunes LR, Oliveira RC, Pereira GG, Siqueira W, de Souza AA, Tsai SM, Zanca AS, Simpson AJ, Brumbley SM, Setúbal JC. Monteiro-Vitorello CB, et al. Among authors: almeida nf jr. Mol Plant Microbe Interact. 2004 Aug;17(8):827-36. doi: 10.1094/MPMI.2004.17.8.827. Mol Plant Microbe Interact. 2004. PMID: 15305603 Free article.
A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000.
Almeida NF, Yan S, Lindeberg M, Studholme DJ, Schneider DJ, Condon B, Liu H, Viana CJ, Warren A, Evans C, Kemen E, Maclean D, Angot A, Martin GB, Jones JD, Collmer A, Setubal JC, Vinatzer BA. Almeida NF, et al. Mol Plant Microbe Interact. 2009 Jan;22(1):52-62. doi: 10.1094/MPMI-22-1-0052. Mol Plant Microbe Interact. 2009. PMID: 19061402 Free article.
Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.
Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW. Slater SC, et al. Among authors: almeida nf. J Bacteriol. 2009 Apr;191(8):2501-11. doi: 10.1128/JB.01779-08. Epub 2009 Feb 27. J Bacteriol. 2009. PMID: 19251847 Free PMC article.
Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
Moreira LM, Almeida NF Jr, Potnis N, Digiampietri LA, Adi SS, Bortolossi JC, da Silva AC, da Silva AM, de Moraes FE, de Oliveira JC, de Souza RF, Facincani AP, Ferraz AL, Ferro MI, Furlan LR, Gimenez DF, Jones JB, Kitajima EW, Laia ML, Leite RP Jr, Nishiyama MY, Rodrigues Neto J, Nociti LA, Norman DJ, Ostroski EH, Pereira HA Jr, Staskawicz BJ, Tezza RI, Ferro JA, Vinatzer BA, Setubal JC. Moreira LM, et al. Among authors: almeida nf jr. BMC Genomics. 2010 Apr 13;11:238. doi: 10.1186/1471-2164-11-238. BMC Genomics. 2010. PMID: 20388224 Free PMC article.
Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper.
Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB. Potnis N, et al. Among authors: almeida nf. BMC Genomics. 2011 Mar 11;12:146. doi: 10.1186/1471-2164-12-146. BMC Genomics. 2011. PMID: 21396108 Free PMC article.
69 results