Kolokotronis SO - Search Results

1

Selective constraint and adaptive potential of West Nile virus within and among naturally infected avian hosts and mosquito vectors.

Nelson CW, Sibley SD, Kolokotronis SO, Hamer GL, Newman CM, Anderson TK, Walker ED, Kitron UD, Brawn JD, Ruiz MO, Goldberg TL. Nelson CW, et al. Among authors: kolokotronis so. Virus Evol. 2018 Jun 12;4(1):vey013. doi: 10.1093/ve/vey013. eCollection 2018 Jan. Virus Evol. 2018. PMID: 29942654 Free PMC article.

2

Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic.

Nelson CW, Ardern Z, Goldberg TL, Meng C, Kuo CH, Ludwig C, Kolokotronis SO, Wei X. Nelson CW, et al. Among authors: kolokotronis so. Elife. 2020 Oct 1;9:e59633. doi: 10.7554/eLife.59633. Elife. 2020. PMID: 33001029 Free PMC article.

3

Episodic Diversifying Selection Shaped the Genomes of Gibbon Ape Leukemia Virus and Related Gammaretroviruses.

Alfano N, Kolokotronis SO, Tsangaras K, Roca AL, Xu W, Eiden MV, Greenwood AD. Alfano N, et al. Among authors: kolokotronis so. J Virol. 2015 Dec 4;90(4):1757-72. doi: 10.1128/JVI.02745-15. Print 2016 Feb 15. J Virol. 2015. PMID: 26637454 Free PMC article.

4

Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999-2009.

Brown TS, Narechania A, Walker JR, Planet PJ, Bifani PJ, Kolokotronis SO, Kreiswirth BN, Mathema B. Brown TS, et al. Among authors: kolokotronis so. BMC Genomics. 2016 Nov 21;17(1):947. doi: 10.1186/s12864-016-3298-6. BMC Genomics. 2016. PMID: 27871225 Free PMC article.

5

Phylogenetic and evolutionary analyses of St. Louis encephalitis virus genomes.

Baillie GJ, Kolokotronis SO, Waltari E, Maffei JG, Kramer LD, Perkins SL. Baillie GJ, et al. Among authors: kolokotronis so. Mol Phylogenet Evol. 2008 May;47(2):717-28. doi: 10.1016/j.ympev.2008.02.015. Epub 2008 Feb 29. Mol Phylogenet Evol. 2008. PMID: 18374605

6

Random Addition Concatenation Analysis: a novel approach to the exploration of phylogenomic signal reveals strong agreement between core and shell genomic partitions in the cyanobacteria.

Narechania A, Baker RH, Sit R, Kolokotronis SO, DeSalle R, Planet PJ. Narechania A, et al. Among authors: kolokotronis so. Genome Biol Evol. 2012;4(1):30-43. doi: 10.1093/gbe/evr121. Epub 2011 Nov 16. Genome Biol Evol. 2012. PMID: 22094860 Free PMC article.

7

The mitogenome of the bed bug Cimex lectularius (Hemiptera: Cimicidae).

Kolokotronis SO, Foox J, Rosenfeld JA, Brugler MR, Reeves D, Benoit JB, Booth W, Robison G, Steffen M, Sakas Z, Palli SR, Schal C, Richards S, Narechania A, Baker RH, Sorkin LN, Amato G, Mason CE, Siddall ME, DeSalle R. Kolokotronis SO, et al. Mitochondrial DNA B Resour. 2016;1(1):425-427. doi: 10.1080/23802359.2016.1180268. Epub 2016 Jun 20. Mitochondrial DNA B Resour. 2016. PMID: 27617305 Free PMC article.

8

Host adaptation drives genetic diversity in a vector-borne disease system.

Combs MA, Tufts DM, Adams B, Lin YP, Kolokotronis SO, Diuk-Wasser MA. Combs MA, et al. Among authors: kolokotronis so. PNAS Nexus. 2023 Aug 8;2(8):pgad234. doi: 10.1093/pnasnexus/pgad234. eCollection 2023 Aug. PNAS Nexus. 2023. PMID: 37559749 Free PMC article.

9

Historical mitochondrial diversity in African leopards (Panthera pardus) revealed by archival museum specimens.

Anco C, Kolokotronis SO, Henschel P, Cunningham SW, Amato G, Hekkala E. Anco C, et al. Among authors: kolokotronis so. Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Apr;29(3):455-473. doi: 10.1080/24701394.2017.1307973. Epub 2017 Apr 19. Mitochondrial DNA A DNA Mapp Seq Anal. 2018. PMID: 28423965

10

Genetic variation at hair length candidate genes in elephants and the extinct woolly mammoth.

Roca AL, Ishida Y, Nikolaidis N, Kolokotronis SO, Fratpietro S, Stewardson K, Hensley S, Tisdale M, Boeskorov G, Greenwood AD. Roca AL, et al. Among authors: kolokotronis so. BMC Evol Biol. 2009 Sep 11;9:232. doi: 10.1186/1471-2148-9-232. BMC Evol Biol. 2009. PMID: 19747392 Free PMC article.

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