Blischak JD - Search Results

1

A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes.

Engelmann BW, Hsiao CJ, Blischak JD, Fourne Y, Khan Z, Ford M, Gilad Y. Engelmann BW, et al. Among authors: blischak jd. Sci Rep. 2018 Aug 14;8(1):12106. doi: 10.1038/s41598-018-30587-3. Sci Rep. 2018. PMID: 30108239 Free PMC article.

2

Batch effects and the effective design of single-cell gene expression studies.

Tung PY, Blischak JD, Hsiao CJ, Knowles DA, Burnett JE, Pritchard JK, Gilad Y. Tung PY, et al. Among authors: blischak jd. Sci Rep. 2017 Jan 3;7:39921. doi: 10.1038/srep39921. Sci Rep. 2017. PMID: 28045081 Free PMC article.

3

Mycobacterial infection induces a specific human innate immune response.

Blischak JD, Tailleux L, Mitrano A, Barreiro LB, Gilad Y. Blischak JD, et al. Sci Rep. 2015 Nov 20;5:16882. doi: 10.1038/srep16882. Sci Rep. 2015. PMID: 26586179 Free PMC article.

4

Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis.

Hsiao CJ, Tung P, Blischak JD, Burnett JE, Barr KA, Dey KK, Stephens M, Gilad Y. Hsiao CJ, et al. Among authors: blischak jd. Genome Res. 2020 Apr;30(4):611-621. doi: 10.1101/gr.247759.118. Epub 2020 Apr 20. Genome Res. 2020. PMID: 32312741 Free PMC article.

5

Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells.

Blischak JD, Tailleux L, Myrthil M, Charlois C, Bergot E, Dinh A, Morizot G, Chény O, Platen CV, Herrmann JL, Brosch R, Barreiro LB, Gilad Y. Blischak JD, et al. Sci Rep. 2017 Jul 18;7(1):5702. doi: 10.1038/s41598-017-05878-w. Sci Rep. 2017. PMID: 28720766 Free PMC article.

6

Discovery and characterization of variance QTLs in human induced pluripotent stem cells.

Sarkar AK, Tung PY, Blischak JD, Burnett JE, Li YI, Stephens M, Gilad Y. Sarkar AK, et al. Among authors: blischak jd. PLoS Genet. 2019 Apr 19;15(4):e1008045. doi: 10.1371/journal.pgen.1008045. eCollection 2019 Apr. PLoS Genet. 2019. PMID: 31002671 Free PMC article.

7

A comparative study of endoderm differentiation in humans and chimpanzees.

Blake LE, Thomas SM, Blischak JD, Hsiao CJ, Chavarria C, Myrthil M, Gilad Y, Pavlovic BJ. Blake LE, et al. Among authors: blischak jd. Genome Biol. 2018 Oct 15;19(1):162. doi: 10.1186/s13059-018-1490-5. Genome Biol. 2018. PMID: 30322406 Free PMC article.

8

Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.

Banovich NE, Lan X, McVicker G, van de Geijn B, Degner JF, Blischak JD, Roux J, Pritchard JK, Gilad Y. Banovich NE, et al. Among authors: blischak jd. PLoS Genet. 2014 Sep 18;10(9):e1004663. doi: 10.1371/journal.pgen.1004663. eCollection 2014 Sep. PLoS Genet. 2014. PMID: 25233095 Free PMC article.

9

Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes.

Knowles DA, Burrows CK, Blischak JD, Patterson KM, Serie DJ, Norton N, Ober C, Pritchard JK, Gilad Y. Knowles DA, et al. Among authors: blischak jd. Elife. 2018 May 8;7:e33480. doi: 10.7554/eLife.33480. Elife. 2018. PMID: 29737278 Free PMC article.

10

Patterns of Transcriptional Response to 1,25-Dihydroxyvitamin D3 and Bacterial Lipopolysaccharide in Primary Human Monocytes.

Kariuki SN, Blischak JD, Nakagome S, Witonsky DB, Di Rienzo A. Kariuki SN, et al. Among authors: blischak jd. G3 (Bethesda). 2016 May 3;6(5):1345-55. doi: 10.1534/g3.116.028712. G3 (Bethesda). 2016. PMID: 26976439 Free PMC article.

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