Allen JP - Search Results

1

Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia.

Walter JM, Ren Z, Yacoub T, Reyfman PA, Shah RD, Abdala-Valencia H, Nam K, Morgan VK, Anekalla KR, Joshi N, McQuattie-Pimentel AC, Chen CI, Chi M, Han S, Gonzalez-Gonzalez FJ, Soberanes S, Aillon RP, Watanabe S, Williams KJN, Lu Z, Paonessa J, Hountras P, Breganio M, Borkowski N, Donnelly HK, Allen JP, Amaral LA, Bharat A, Misharin AV, Bagheri N, Hauser AR, Budinger GRS, Wunderink RG. Walter JM, et al. Among authors: allen jp. Am J Respir Crit Care Med. 2019 May 15;199(10):1225-1237. doi: 10.1164/rccm.201804-0650OC. Am J Respir Crit Care Med. 2019. PMID: 30398927 Free PMC article.

2

Draft genome sequence of the Pseudomonas aeruginosa bloodstream isolate PABL056.

Ozer EA, Allen JP, Hauser AR. Ozer EA, et al. Among authors: allen jp. J Bacteriol. 2012 Nov;194(21):5999. doi: 10.1128/JB.01421-12. J Bacteriol. 2012. PMID: 23045505 Free PMC article.

3

Different paths to pathogenesis.

Allen JP, Ozer EA, Hauser AR. Allen JP, et al. Trends Microbiol. 2014 Apr;22(4):168-9. doi: 10.1016/j.tim.2014.02.013. Epub 2014 Mar 12. Trends Microbiol. 2014. PMID: 24629347 Free PMC article.

4

Diversity of Contact-Dependent Growth Inhibition Systems of Pseudomonas aeruginosa.

Allen JP, Hauser AR. Allen JP, et al. J Bacteriol. 2019 Jun 21;201(14):e00776-18. doi: 10.1128/JB.00776-18. Print 2019 Jul 15. J Bacteriol. 2019. PMID: 31036723 Free PMC article. Review.

5

Characterization of the core and accessory genomes of Pseudomonas aeruginosa using bioinformatic tools Spine and AGEnt.

Ozer EA, Allen JP, Hauser AR. Ozer EA, et al. Among authors: allen jp. BMC Genomics. 2014 Aug 29;15(1):737. doi: 10.1186/1471-2164-15-737. BMC Genomics. 2014. PMID: 25168460 Free PMC article.

6

Systemic infection facilitates transmission of Pseudomonas aeruginosa in mice.

Bachta KER, Allen JP, Cheung BH, Chiu CH, Hauser AR. Bachta KER, et al. Among authors: allen jp. Nat Commun. 2020 Jan 28;11(1):543. doi: 10.1038/s41467-020-14363-4. Nat Commun. 2020. PMID: 31992714 Free PMC article.

7

A comparative genomics approach identifies contact-dependent growth inhibition as a virulence determinant.

Allen JP, Ozer EA, Minasov G, Shuvalova L, Kiryukhina O, Satchell KJF, Hauser AR. Allen JP, et al. Proc Natl Acad Sci U S A. 2020 Mar 24;117(12):6811-6821. doi: 10.1073/pnas.1919198117. Epub 2020 Mar 10. Proc Natl Acad Sci U S A. 2020. PMID: 32156726 Free PMC article.

8

A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates.

Pincus NB, Ozer EA, Allen JP, Nguyen M, Davis JJ, Winter DR, Chuang CH, Chiu CH, Zamorano L, Oliver A, Hauser AR. Pincus NB, et al. Among authors: allen jp. mBio. 2020 Aug 25;11(4):e01527-20. doi: 10.1128/mBio.01527-20. mBio. 2020. PMID: 32843552 Free PMC article.

9

Long-term Persistence of an Extensively Drug-Resistant Subclade of Globally Distributed Pseudomonas aeruginosa Clonal Complex 446 in an Academic Medical Center.

Pincus NB, Bachta KER, Ozer EA, Allen JP, Pura ON, Qi C, Rhodes NJ, Marty FM, Pandit A, Mekalanos JJ, Oliver A, Hauser AR. Pincus NB, et al. Among authors: allen jp. Clin Infect Dis. 2020 Sep 12;71(6):1524-1531. doi: 10.1093/cid/ciz973. Clin Infect Dis. 2020. PMID: 31583403 Free PMC article.

10

Forest and Trees: Exploring Bacterial Virulence with Genome-wide Association Studies and Machine Learning.

Allen JP, Snitkin E, Pincus NB, Hauser AR. Allen JP, et al. Trends Microbiol. 2021 Jul;29(7):621-633. doi: 10.1016/j.tim.2020.12.002. Epub 2021 Jan 14. Trends Microbiol. 2021. PMID: 33455849 Free PMC article. Review.

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