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The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations.
Tett A, Huang KD, Asnicar F, Fehlner-Peach H, Pasolli E, Karcher N, Armanini F, Manghi P, Bonham K, Zolfo M, De Filippis F, Magnabosco C, Bonneau R, Lusingu J, Amuasi J, Reinhard K, Rattei T, Boulund F, Engstrand L, Zink A, Collado MC, Littman DR, Eibach D, Ercolini D, Rota-Stabelli O, Huttenhower C, Maixner F, Segata N. Tett A, et al. Cell Host Microbe. 2019 Nov 13;26(5):666-679.e7. doi: 10.1016/j.chom.2019.08.018. Epub 2019 Oct 10. Cell Host Microbe. 2019. PMID: 31607556 Free PMC article.
Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations.
Karcher N, Pasolli E, Asnicar F, Huang KD, Tett A, Manara S, Armanini F, Bain D, Duncan SH, Louis P, Zolfo M, Manghi P, Valles-Colomer M, Raffaetà R, Rota-Stabelli O, Collado MC, Zeller G, Falush D, Maixner F, Walker AW, Huttenhower C, Segata N. Karcher N, et al. Genome Biol. 2020 Jun 8;21(1):138. doi: 10.1186/s13059-020-02042-y. Genome Biol. 2020. PMID: 32513234 Free PMC article.
Reconstruction of ancient microbial genomes from the human gut.
Wibowo MC, Yang Z, Borry M, Hübner A, Huang KD, Tierney BT, Zimmerman S, Barajas-Olmos F, Contreras-Cubas C, García-Ortiz H, Martínez-Hernández A, Luber JM, Kirstahler P, Blohm T, Smiley FE, Arnold R, Ballal SA, Pamp SJ, Russ J, Maixner F, Rota-Stabelli O, Segata N, Reinhard K, Orozco L, Warinner C, Snow M, LeBlanc S, Kostic AD. Wibowo MC, et al. Nature. 2021 Jun;594(7862):234-239. doi: 10.1038/s41586-021-03532-0. Epub 2021 May 12. Nature. 2021. PMID: 33981035 Free PMC article.
Epidemiological and Evolutionary Analysis of West Nile Virus Lineage 2 in Italy.
Mencattelli G, Silverj A, Iapaolo F, Ippoliti C, Teodori L, Di Gennaro A, Curini V, Candeloro L, Conte A, Polci A, Morelli D, Perrotta MG, Marini G, Rosà R, Monaco F, Segata N, Rizzoli A, Rota-Stabelli O, Savini G, West Nile Working Group. Mencattelli G, et al. Among authors: rota stabelli o. Viruses. 2022 Dec 22;15(1):35. doi: 10.3390/v15010035. Viruses. 2022. PMID: 36680076 Free PMC article.
67 results