Orabi B - Search Results

1

Structural variation and fusion detection using targeted sequencing data from circulating cell free DNA.

Gawroński AR, Lin YY, McConeghy B, LeBihan S, Asghari H, Koçkan C, Orabi B, Adra N, Pili R, Collins CC, Sahinalp SC, Hach F. Gawroński AR, et al. Among authors: orabi b. Nucleic Acids Res. 2019 Apr 23;47(7):e38. doi: 10.1093/nar/gkz067. Nucleic Acids Res. 2019. PMID: 30759232 Free PMC article.

2

Alignment-free clustering of UMI tagged DNA molecules.

Orabi B, Erhan E, McConeghy B, Volik SV, Le Bihan S, Bell R, Collins CC, Chauve C, Hach F. Orabi B, et al. Bioinformatics. 2019 Jun 1;35(11):1829-1836. doi: 10.1093/bioinformatics/bty888. Bioinformatics. 2019. PMID: 30351359

3

Fast and accurate matching of cellular barcodes across short-reads and long-reads of single-cell RNA-seq experiments.

Ebrahimi G, Orabi B, Robinson M, Chauve C, Flannigan R, Hach F. Ebrahimi G, et al. Among authors: orabi b. iScience. 2022 Jun 7;25(7):104530. doi: 10.1016/j.isci.2022.104530. eCollection 2022 Jul 15. iScience. 2022. PMID: 35747387 Free PMC article.

4

Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing.

Orabi B, Xie N, McConeghy B, Dong X, Chauve C, Hach F. Orabi B, et al. Nucleic Acids Res. 2023 Jan 25;51(2):e11. doi: 10.1093/nar/gkac1112. Nucleic Acids Res. 2023. PMID: 36478271 Free PMC article.

5

Extracorporeal Membrane Oxygenation Pathway for Management of Refractory Cardiac Arrest: a Retrospective Study From a National Center of Extracorporeal Cardiopulmonary Resuscitation.

Shehatta AL, Kaddoura R, Orabi B, Mohamed Ibrahim MI, El-Menyar A, Alyafei SA, Alkhulaifi A, Ibrahim AS, Hassan IF, Omar AS. Shehatta AL, et al. Among authors: orabi b. Crit Pathw Cardiol. 2024 Sep 1;23(3):149-158. doi: 10.1097/HPC.0000000000000352. Epub 2024 Feb 20. Crit Pathw Cardiol. 2024. PMID: 38381697

6

TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator.

Karaoğlanoğlu F, Orabi B, Flannigan R, Chauve C, Hach F. Karaoğlanoğlu F, et al. Among authors: orabi b. Bioinformatics. 2024 Feb 1;40(2):btae051. doi: 10.1093/bioinformatics/btae051. Bioinformatics. 2024. PMID: 38273664 Free PMC article.

7

Trends in Off-Label Indications of Non-Vitamin K Antagonist Oral Anticoagulants in Acute Coronary Syndrome.

Kaddoura R, Orabi B, Yassin MA, Omar AS. Kaddoura R, et al. Among authors: orabi b. Rev Cardiovasc Med. 2023 Jun 25;24(6):180. doi: 10.31083/j.rcm2406180. eCollection 2023 Jun. Rev Cardiovasc Med. 2023. PMID: 39077529 Free PMC article. Review.

8

Effectiveness of a structured pharmacist-delivered intervention for patients post-acute coronary syndromes on all-cause hospitalizations and cardiac-related hospital readmissions: a prospective quasi-experimental study.

El Hajj MS, Kaddoura R, Abu Yousef SEA, Orabi B, Awaisu A, AlYafei S, Shami R, Mahfoud ZR. El Hajj MS, et al. Among authors: orabi b. Int J Clin Pharm. 2023 Jun;45(3):630-640. doi: 10.1007/s11096-023-01538-4. Epub 2023 Feb 16. Int J Clin Pharm. 2023. PMID: 36795303 Free PMC article.

9

Effectiveness of Sacubitril/Valsartan in Heart Failure with Reduced Ejection Fraction Using Real-World Data: An Updated Systematic Review and Meta-Analysis.

Rahhal A, Kasem M, Orabi B, Hamou F, Abuyousef S, Mahfouz A, Alyafei S, Shoukry AE, Ahmed E. Rahhal A, et al. Among authors: orabi b. Curr Probl Cardiol. 2023 Jan;48(1):101412. doi: 10.1016/j.cpcardiol.2022.101412. Epub 2022 Sep 26. Curr Probl Cardiol. 2023. PMID: 36170910 Free article.

10

Impact of COVID-19 pandemic on liver, liver diseases, and liver transplantation programs in intensive care units.

Omar AS, Kaddoura R, Orabi B, Hanoura S. Omar AS, et al. Among authors: orabi b. World J Hepatol. 2021 Oct 27;13(10):1215-1233. doi: 10.4254/wjh.v13.i10.1215. World J Hepatol. 2021. PMID: 34786163 Free PMC article. Review.

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