James DE - Search Results

1

An integrative systems genetic analysis of mammalian lipid metabolism.

Parker BL, Calkin AC, Seldin MM, Keating MF, Tarling EJ, Yang P, Moody SC, Liu Y, Zerenturk EJ, Needham EJ, Miller ML, Clifford BL, Morand P, Watt MJ, Meex RCR, Peng KY, Lee R, Jayawardana K, Pan C, Mellett NA, Weir JM, Lazarus R, Lusis AJ, Meikle PJ, James DE, de Aguiar Vallim TQ, Drew BG. Parker BL, et al. Among authors: james de, de aguiar vallim tq. Nature. 2019 Mar;567(7747):187-193. doi: 10.1038/s41586-019-0984-y. Epub 2019 Feb 27. Nature. 2019. PMID: 30814737 Free PMC article.

2

Pigment epithelium-derived factor contributes to insulin resistance in obesity.

Crowe S, Wu LE, Economou C, Turpin SM, Matzaris M, Hoehn KL, Hevener AL, James DE, Duh EJ, Watt MJ. Crowe S, et al. Among authors: james de. Cell Metab. 2009 Jul;10(1):40-7. doi: 10.1016/j.cmet.2009.06.001. Cell Metab. 2009. PMID: 19583952 Free article.

3

Dynamic adipocyte phosphoproteome reveals that Akt directly regulates mTORC2.

Humphrey SJ, Yang G, Yang P, Fazakerley DJ, Stöckli J, Yang JY, James DE. Humphrey SJ, et al. Among authors: james de. Cell Metab. 2013 Jun 4;17(6):1009-1020. doi: 10.1016/j.cmet.2013.04.010. Epub 2013 May 16. Cell Metab. 2013. PMID: 23684622 Free PMC article.

4

Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway.

Yang P, Patrick E, Tan SX, Fazakerley DJ, Burchfield J, Gribben C, Prior MJ, James DE, Hwa Yang Y. Yang P, et al. Among authors: james de. Bioinformatics. 2014 Mar 15;30(6):808-14. doi: 10.1093/bioinformatics/btt616. Epub 2013 Oct 27. Bioinformatics. 2014. PMID: 24167158 Free PMC article.

5

Structural basis for phosphorylation and lysine acetylation cross-talk in a kinase motif associated with myocardial ischemia and cardioprotection.

Parker BL, Shepherd NE, Trefely S, Hoffman NJ, White MY, Engholm-Keller K, Hambly BD, Larsen MR, James DE, Cordwell SJ. Parker BL, et al. Among authors: james de. J Biol Chem. 2014 Sep 12;289(37):25890-906. doi: 10.1074/jbc.M114.556035. Epub 2014 Jul 9. J Biol Chem. 2014. PMID: 25008320 Free PMC article.

6

ISL1 regulates peroxisome proliferator-activated receptor γ activation and early adipogenesis via bone morphogenetic protein 4-dependent and -independent mechanisms.

Ma X, Yang P, Kaplan WH, Lee BH, Wu LE, Yang JY, Yasunaga M, Sato K, Chisholm DJ, James DE. Ma X, et al. Among authors: james de. Mol Cell Biol. 2014 Oct 1;34(19):3607-17. doi: 10.1128/MCB.00583-14. Epub 2014 Jul 21. Mol Cell Biol. 2014. PMID: 25047837 Free PMC article.

7

Targeted phosphoproteomics of insulin signaling using data-independent acquisition mass spectrometry.

Parker BL, Yang G, Humphrey SJ, Chaudhuri R, Ma X, Peterman S, James DE. Parker BL, et al. Among authors: james de. Sci Signal. 2015 Jun 9;8(380):rs6. doi: 10.1126/scisignal.aaa3139. Sci Signal. 2015. PMID: 26060331

8

PhosphOrtholog: a web-based tool for cross-species mapping of orthologous protein post-translational modifications.

Chaudhuri R, Sadrieh A, Hoffman NJ, Parker BL, Humphrey SJ, Stöckli J, Hill AP, James DE, Yang JY. Chaudhuri R, et al. Among authors: james de. BMC Genomics. 2015 Aug 19;16(1):617. doi: 10.1186/s12864-015-1820-x. BMC Genomics. 2015. PMID: 26283093 Free PMC article.

9

Kinome Screen Identifies PFKFB3 and Glucose Metabolism as Important Regulators of the Insulin/Insulin-like Growth Factor (IGF)-1 Signaling Pathway.

Trefely S, Khoo PS, Krycer JR, Chaudhuri R, Fazakerley DJ, Parker BL, Sultani G, Lee J, Stephan JP, Torres E, Jung K, Kuijl C, James DE, Junutula JR, Stöckli J. Trefely S, et al. Among authors: james de. J Biol Chem. 2015 Oct 23;290(43):25834-46. doi: 10.1074/jbc.M115.658815. Epub 2015 Sep 4. J Biol Chem. 2015. PMID: 26342081 Free PMC article.

10

Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data.

Yang P, Humphrey SJ, James DE, Yang YH, Jothi R. Yang P, et al. Among authors: james de. Bioinformatics. 2016 Jan 15;32(2):252-9. doi: 10.1093/bioinformatics/btv550. Epub 2015 Sep 22. Bioinformatics. 2016. PMID: 26395771 Free PMC article.

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