Ellison CE - Search Results

1

Adenine Methylation in Drosophila Is Associated with the Tissue-Specific Expression of Developmental and Regulatory Genes.

Shah K, Cao W, Ellison CE. Shah K, et al. Among authors: ellison ce. G3 (Bethesda). 2019 Jun 5;9(6):1893-1900. doi: 10.1534/g3.119.400023. G3 (Bethesda). 2019. PMID: 30988038 Free PMC article.

2

Nanopore sequencing and Hi-C scaffolding provide insight into the evolutionary dynamics of transposable elements and piRNA production in wild strains of Drosophila melanogaster.

Ellison CE, Cao W. Ellison CE, et al. Nucleic Acids Res. 2020 Jan 10;48(1):290-303. doi: 10.1093/nar/gkz1080. Nucleic Acids Res. 2020. PMID: 31754714 Free PMC article.

3

3D genome evolution and reorganization in the Drosophila melanogaster species group.

Torosin NS, Anand A, Golla TR, Cao W, Ellison CE. Torosin NS, et al. Among authors: ellison ce. PLoS Genet. 2020 Dec 7;16(12):e1009229. doi: 10.1371/journal.pgen.1009229. eCollection 2020 Dec. PLoS Genet. 2020. PMID: 33284803 Free PMC article.

4

Telomeric TART elements target the piRNA machinery in Drosophila.

Ellison CE, Kagda MS, Cao W. Ellison CE, et al. PLoS Biol. 2020 Dec 21;18(12):e3000689. doi: 10.1371/journal.pbio.3000689. eCollection 2020 Dec. PLoS Biol. 2020. PMID: 33347429 Free PMC article.

5

Three-dimensional interactions between enhancers and promoters during intestinal differentiation depend upon HNF4.

Chen L, Cao W, Aita R, Aldea D, Flores J, Gao N, Bonder EM, Ellison CE, Verzi MP. Chen L, et al. Among authors: ellison ce. Cell Rep. 2021 Jan 26;34(4):108679. doi: 10.1016/j.celrep.2020.108679. Cell Rep. 2021. PMID: 33503426 Free PMC article.

6

The nuclear receptor HNF4 drives a brush border gene program conserved across murine intestine, kidney, and embryonic yolk sac.

Chen L, Luo S, Dupre A, Vasoya RP, Parthasarathy A, Aita R, Malhotra R, Hur J, Toke NH, Chiles E, Yang M, Cao W, Flores J, Ellison CE, Gao N, Sahota A, Su X, Bonder EM, Verzi MP. Chen L, et al. Among authors: ellison ce. Nat Commun. 2021 May 17;12(1):2886. doi: 10.1038/s41467-021-22761-5. Nat Commun. 2021. PMID: 34001900 Free PMC article.

7

A transposon expression burst accompanies the activation of Y-chromosome fertility genes during Drosophila spermatogenesis.

Lawlor MA, Cao W, Ellison CE. Lawlor MA, et al. Among authors: ellison ce. Nat Commun. 2021 Nov 25;12(1):6854. doi: 10.1038/s41467-021-27136-4. Nat Commun. 2021. PMID: 34824217 Free PMC article.

8

Sex-specific variation in R-loop formation in Drosophila melanogaster.

Stanek TJ, Cao W, Mehra RM, Ellison CE. Stanek TJ, et al. Among authors: ellison ce. PLoS Genet. 2022 Jun 10;18(6):e1010268. doi: 10.1371/journal.pgen.1010268. eCollection 2022 Jun. PLoS Genet. 2022. PMID: 35687614 Free PMC article.

9

Mode and Tempo of 3D Genome Evolution in Drosophila.

Torosin NS, Golla TR, Lawlor MA, Cao W, Ellison CE. Torosin NS, et al. Among authors: ellison ce. Mol Biol Evol. 2022 Nov 3;39(11):msac216. doi: 10.1093/molbev/msac216. Mol Biol Evol. 2022. PMID: 36201625 Free PMC article.

10

Long-read genome assemblies for the study of chromosome expansion: Drosophila kikkawai, Drosophila takahashii, Drosophila bipectinata, and Drosophila ananassae.

Leung W, Torosin N, Cao W, Reed LK, Arrigo C, Elgin SCR, Ellison CE. Leung W, et al. Among authors: ellison ce. G3 (Bethesda). 2023 Sep 30;13(10):jkad191. doi: 10.1093/g3journal/jkad191. G3 (Bethesda). 2023. PMID: 37611223 Free PMC article.

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