Davey NE - Search Results

1

SIRT3 controls brown fat thermogenesis by deacetylation regulation of pathways upstream of UCP1.

Sebaa R, Johnson J, Pileggi C, Norgren M, Xuan J, Sai Y, Tong Q, Krystkowiak I, Bondy-Chorney E, Davey NE, Krogan N, Downey M, Harper ME. Sebaa R, et al. Among authors: davey ne. Mol Metab. 2019 Jul;25:35-49. doi: 10.1016/j.molmet.2019.04.008. Epub 2019 Apr 17. Mol Metab. 2019. PMID: 31060926 Free PMC article.

2

Acetylome profiling reveals overlap in the regulation of diverse processes by sirtuins, gcn5, and esa1.

Downey M, Johnson JR, Davey NE, Newton BW, Johnson TL, Galaang S, Seller CA, Krogan N, Toczyski DP. Downey M, et al. Among authors: davey ne. Mol Cell Proteomics. 2015 Jan;14(1):162-76. doi: 10.1074/mcp.M114.043141. Epub 2014 Nov 7. Mol Cell Proteomics. 2015. PMID: 25381059 Free PMC article.

3

Discovery of short linear motif-mediated interactions through phage display of intrinsically disordered regions of the human proteome.

Davey NE, Seo MH, Yadav VK, Jeon J, Nim S, Krystkowiak I, Blikstad C, Dong D, Markova N, Kim PM, Ivarsson Y. Davey NE, et al. FEBS J. 2017 Feb;284(3):485-498. doi: 10.1111/febs.13995. Epub 2017 Jan 18. FEBS J. 2017. PMID: 28002650 Free article.

4

SLiMSearch: a framework for proteome-wide discovery and annotation of functional modules in intrinsically disordered regions.

Krystkowiak I, Davey NE. Krystkowiak I, et al. Among authors: davey ne. Nucleic Acids Res. 2017 Jul 3;45(W1):W464-W469. doi: 10.1093/nar/gkx238. Nucleic Acids Res. 2017. PMID: 28387819 Free PMC article.

5

A Screen for Candidate Targets of Lysine Polyphosphorylation Uncovers a Conserved Network Implicated in Ribosome Biogenesis.

Bentley-DeSousa A, Holinier C, Moteshareie H, Tseng YC, Kajjo S, Nwosu C, Amodeo GF, Bondy-Chorney E, Sai Y, Rudner A, Golshani A, Davey NE, Downey M. Bentley-DeSousa A, et al. Among authors: davey ne. Cell Rep. 2018 Mar 27;22(13):3427-3439. doi: 10.1016/j.celrep.2018.02.104. Cell Rep. 2018. PMID: 29590613 Free article.

6

PSSMSearch: a server for modeling, visualization, proteome-wide discovery and annotation of protein motif specificity determinants.

Krystkowiak I, Manguy J, Davey NE. Krystkowiak I, et al. Among authors: davey ne. Nucleic Acids Res. 2018 Jul 2;46(W1):W235-W241. doi: 10.1093/nar/gky426. Nucleic Acids Res. 2018. PMID: 29873773 Free PMC article.

7

Systematic Discovery of Short Linear Motifs Decodes Calcineurin Phosphatase Signaling.

Wigington CP, Roy J, Damle NP, Yadav VK, Blikstad C, Resch E, Wong CJ, Mackay DR, Wang JT, Krystkowiak I, Bradburn DA, Tsekitsidou E, Hong SH, Kaderali MA, Xu SL, Stearns T, Gingras AC, Ullman KS, Ivarsson Y, Davey NE, Cyert MS. Wigington CP, et al. Among authors: davey ne. Mol Cell. 2020 Jul 16;79(2):342-358.e12. doi: 10.1016/j.molcel.2020.06.029. Epub 2020 Jul 8. Mol Cell. 2020. PMID: 32645368 Free PMC article.

8

Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.

Benz C, Ali M, Krystkowiak I, Simonetti L, Sayadi A, Mihalic F, Kliche J, Andersson E, Jemth P, Davey NE, Ivarsson Y. Benz C, et al. Among authors: davey ne. Mol Syst Biol. 2022 Jan;18(1):e10584. doi: 10.15252/msb.202110584. Mol Syst Biol. 2022. PMID: 35044719 Free PMC article.

9

Proteome-scale characterisation of motif-based interactome rewiring by disease mutations.

Kliche J, Simonetti L, Krystkowiak I, Kuss H, Diallo M, Rask E, Nilsson J, Davey NE, Ivarsson Y. Kliche J, et al. Among authors: davey ne. Mol Syst Biol. 2024 Sep;20(9):1025-1048. doi: 10.1038/s44320-024-00055-4. Epub 2024 Jul 15. Mol Syst Biol. 2024. PMID: 39009827 Free PMC article.

10

A Consensus Binding Motif for the PP4 Protein Phosphatase.

Ueki Y, Kruse T, Weisser MB, Sundell GN, Larsen MSY, Mendez BL, Jenkins NP, Garvanska DH, Cressey L, Zhang G, Davey N, Montoya G, Ivarsson Y, Kettenbach AN, Nilsson J. Ueki Y, et al. Mol Cell. 2019 Dec 19;76(6):953-964.e6. doi: 10.1016/j.molcel.2019.08.029. Epub 2019 Oct 1. Mol Cell. 2019. PMID: 31585692 Free PMC article.

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