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High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types.
Shulse CN, Cole BJ, Ciobanu D, Lin J, Yoshinaga Y, Gouran M, Turco GM, Zhu Y, O'Malley RC, Brady SM, Dickel DE. Shulse CN, et al. Cell Rep. 2019 May 14;27(7):2241-2247.e4. doi: 10.1016/j.celrep.2019.04.054. Cell Rep. 2019. PMID: 31091459 Free PMC article.
Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions.
Kawakatsu T, Huang SC, Jupe F, Sasaki E, Schmitz RJ, Urich MA, Castanon R, Nery JR, Barragan C, He Y, Chen H, Dubin M, Lee CR, Wang C, Bemm F, Becker C, O'Neil R, O'Malley RC, Quarless DX; 1001 Genomes Consortium; Schork NJ, Weigel D, Nordborg M, Ecker JR. Kawakatsu T, et al. Cell. 2016 Jul 14;166(2):492-505. doi: 10.1016/j.cell.2016.06.044. Cell. 2016. PMID: 27419873 Free PMC article.
Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses.
Varoquaux N, Cole B, Gao C, Pierroz G, Baker CR, Patel D, Madera M, Jeffers T, Hollingsworth J, Sievert J, Yoshinaga Y, Owiti JA, Singan VR, DeGraaf S, Xu L, Blow MJ, Harrison MJ, Visel A, Jansson C, Niyogi KK, Hutmacher R, Coleman-Derr D, O'Malley RC, Taylor JW, Dahlberg J, Vogel JP, Lemaux PG, Purdom E. Varoquaux N, et al. Proc Natl Acad Sci U S A. 2019 Dec 26;116(52):27124-27132. doi: 10.1073/pnas.1907500116. Epub 2019 Dec 5. Proc Natl Acad Sci U S A. 2019. PMID: 31806758 Free PMC article.
Plant single-cell solutions for energy and the environment.
Cole B, Bergmann D, Blaby-Haas CE, Blaby IK, Bouchard KE, Brady SM, Ciobanu D, Coleman-Derr D, Leiboff S, Mortimer JC, Nobori T, Rhee SY, Schmutz J, Simmons BA, Singh AK, Sinha N, Vogel JP, O'Malley RC, Visel A, Dickel DE. Cole B, et al. Commun Biol. 2021 Aug 12;4(1):962. doi: 10.1038/s42003-021-02477-4. Commun Biol. 2021. PMID: 34385583 Free PMC article. Review.
Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics.
Van Goethem MW, Osborn AR, Bowen BP, Andeer PF, Swenson TL, Clum A, Riley R, He G, Koriabine M, Sandor L, Yan M, Daum CG, Yoshinaga Y, Makhalanyane TP, Garcia-Pichel F, Visel A, Pennacchio LA, O'Malley RC, Northen TR. Van Goethem MW, et al. Among authors: o malley rc. Commun Biol. 2021 Nov 18;4(1):1302. doi: 10.1038/s42003-021-02809-4. Commun Biol. 2021. PMID: 34795375 Free PMC article.
Persistence and plasticity in bacterial gene regulation.
Baumgart LA, Lee JE, Salamov A, Dilworth DJ, Na H, Mingay M, Blow MJ, Zhang Y, Yoshinaga Y, Daum CG, O'Malley RC. Baumgart LA, et al. Among authors: o malley rc. Nat Methods. 2021 Dec;18(12):1499-1505. doi: 10.1038/s41592-021-01312-2. Epub 2021 Nov 25. Nat Methods. 2021. PMID: 34824476
56 results