Nabavi S - Search Results

1

Deep convolutional neural networks for mammography: advances, challenges and applications.

Abdelhafiz D, Yang C, Ammar R, Nabavi S. Abdelhafiz D, et al. Among authors: nabavi s. BMC Bioinformatics. 2019 Jun 6;20(Suppl 11):281. doi: 10.1186/s12859-019-2823-4. BMC Bioinformatics. 2019. PMID: 31167642 Free PMC article.

2

An evaluation of copy number variation detection tools for cancer using whole exome sequencing data.

Zare F, Dow M, Monteleone N, Hosny A, Nabavi S. Zare F, et al. Among authors: nabavi s. BMC Bioinformatics. 2017 May 31;18(1):286. doi: 10.1186/s12859-017-1705-x. BMC Bioinformatics. 2017. PMID: 28569140 Free PMC article.

3

Noise cancellation using total variation for copy number variation detection.

Zare F, Hosny A, Nabavi S. Zare F, et al. Among authors: nabavi s. BMC Bioinformatics. 2018 Oct 22;19(Suppl 11):361. doi: 10.1186/s12859-018-2332-x. BMC Bioinformatics. 2018. PMID: 30343665 Free PMC article.

4

Comparative analysis of differential gene expression analysis tools for single-cell RNA sequencing data.

Wang T, Li B, Nelson CE, Nabavi S. Wang T, et al. Among authors: nabavi s. BMC Bioinformatics. 2019 Jan 18;20(1):40. doi: 10.1186/s12859-019-2599-6. BMC Bioinformatics. 2019. PMID: 30658573 Free PMC article.

5

Convolutional neural network for automated mass segmentation in mammography.

Abdelhafiz D, Bi J, Ammar R, Yang C, Nabavi S. Abdelhafiz D, et al. Among authors: nabavi s. BMC Bioinformatics. 2020 Dec 9;21(Suppl 1):192. doi: 10.1186/s12859-020-3521-y. BMC Bioinformatics. 2020. PMID: 33297952 Free PMC article.

6

Applying deep learning in digital breast tomosynthesis for automatic breast cancer detection: A review.

Bai J, Posner R, Wang T, Yang C, Nabavi S. Bai J, et al. Among authors: nabavi s. Med Image Anal. 2021 Jul;71:102049. doi: 10.1016/j.media.2021.102049. Epub 2021 Apr 3. Med Image Anal. 2021. PMID: 33901993 Free article. Review.

7

Single-cell classification using graph convolutional networks.

Wang T, Bai J, Nabavi S. Wang T, et al. Among authors: nabavi s. BMC Bioinformatics. 2021 Jul 8;22(1):364. doi: 10.1186/s12859-021-04278-2. BMC Bioinformatics. 2021. PMID: 34238220 Free PMC article.

8

Feature fusion Siamese network for breast cancer detection comparing current and prior mammograms.

Bai J, Jin A, Wang T, Yang C, Nabavi S. Bai J, et al. Among authors: nabavi s. Med Phys. 2022 Jun;49(6):3654-3669. doi: 10.1002/mp.15598. Epub 2022 Apr 22. Med Phys. 2022. PMID: 35271746

9

A multimodal graph neural network framework for cancer molecular subtype classification.

Li B, Nabavi S. Li B, et al. Among authors: nabavi s. BMC Bioinformatics. 2024 Jan 15;25(1):27. doi: 10.1186/s12859-023-05622-4. BMC Bioinformatics. 2024. PMID: 38225583 Free PMC article.

10

Unsupervised feature correlation model to predict breast abnormal variation maps in longitudinal mammograms.

Bai J, Jin A, Adams M, Yang C, Nabavi S. Bai J, et al. Among authors: nabavi s. Comput Med Imaging Graph. 2024 Apr;113:102341. doi: 10.1016/j.compmedimag.2024.102341. Epub 2024 Jan 20. Comput Med Imaging Graph. 2024. PMID: 38277769

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