Braun TA - Search Results

1

Machine learning with the TCGA-HNSC dataset: improving usability by addressing inconsistency, sparsity, and high-dimensionality.

Rendleman MC, Buatti JM, Braun TA, Smith BJ, Nwakama C, Beichel RR, Brown B, Casavant TL. Rendleman MC, et al. Among authors: braun ta. BMC Bioinformatics. 2019 Jun 17;20(1):339. doi: 10.1186/s12859-019-2929-8. BMC Bioinformatics. 2019. PMID: 31208324 Free PMC article.

2

Pooled library tissue tags for EST-based gene discovery.

Gavin AJ, Scheetz TE, Roberts CA, O'Leary B, Braun TA, Sheffield VC, Soares MB, Robinson JP, Casavant TL. Gavin AJ, et al. Among authors: braun ta. Bioinformatics. 2002 Sep;18(9):1162-6. doi: 10.1093/bioinformatics/18.9.1162. Bioinformatics. 2002. PMID: 12217907

3

ESTprep: preprocessing cDNA sequence reads.

Scheetz TE, Trivedi N, Roberts CA, Kucaba T, Berger B, Robinson NL, Birkett CL, Gavin AJ, O'Leary B, Braun TA, Bonaldo MF, Robinson JP, Sheffield VC, Soares MB, Casavant TL. Scheetz TE, et al. Among authors: braun ta. Bioinformatics. 2003 Jul 22;19(11):1318-24. doi: 10.1093/bioinformatics/btg159. Bioinformatics. 2003. PMID: 12874042

4

Comparative genomic analysis identifies an ADP-ribosylation factor-like gene as the cause of Bardet-Biedl syndrome (BBS3).

Chiang AP, Nishimura D, Searby C, Elbedour K, Carmi R, Ferguson AL, Secrist J, Braun T, Casavant T, Stone EM, Sheffield VC. Chiang AP, et al. Am J Hum Genet. 2004 Sep;75(3):475-84. doi: 10.1086/423903. Epub 2004 Jul 16. Am J Hum Genet. 2004. PMID: 15258860 Free PMC article.

5

Missense variations in the fibulin 5 gene and age-related macular degeneration.

Stone EM, Braun TA, Russell SR, Kuehn MH, Lotery AJ, Moore PA, Eastman CG, Casavant TL, Sheffield VC. Stone EM, et al. Among authors: braun ta. N Engl J Med. 2004 Jul 22;351(4):346-53. doi: 10.1056/NEJMoa040833. N Engl J Med. 2004. PMID: 15269314 Free article.

6

Genetic characterization of commonly used glioma cell lines in the rat animal model system.

Sibenaller ZA, Etame AB, Ali MM, Barua M, Braun TA, Casavant TL, Ryken TC. Sibenaller ZA, et al. Among authors: braun ta. Neurosurg Focus. 2005 Oct 15;19(4):E1. doi: 10.3171/foc.2005.19.4.2. Neurosurg Focus. 2005. PMID: 16241103

7

Prioritizing regions of candidate genes for efficient mutation screening.

Braun TA, Shankar SP, Davis S, O'Leary B, Scheetz TE, Clark AF, Sheffield VC, Casavant TL, Stone EM. Braun TA, et al. Hum Mutat. 2006 Feb;27(2):195-200. doi: 10.1002/humu.20247. Hum Mutat. 2006. PMID: 16395665

8

Homozygosity mapping with SNP arrays identifies TRIM32, an E3 ubiquitin ligase, as a Bardet-Biedl syndrome gene (BBS11).

Chiang AP, Beck JS, Yen HJ, Tayeh MK, Scheetz TE, Swiderski RE, Nishimura DY, Braun TA, Kim KY, Huang J, Elbedour K, Carmi R, Slusarski DC, Casavant TL, Stone EM, Sheffield VC. Chiang AP, et al. Among authors: braun ta. Proc Natl Acad Sci U S A. 2006 Apr 18;103(16):6287-92. doi: 10.1073/pnas.0600158103. Epub 2006 Apr 10. Proc Natl Acad Sci U S A. 2006. PMID: 16606853 Free PMC article.

9

Genome-wide identification of pseudogenes capable of disease-causing gene conversion.

Bischof JM, Chiang AP, Scheetz TE, Stone EM, Casavant TL, Sheffield VC, Braun TA. Bischof JM, et al. Among authors: braun ta. Hum Mutat. 2006 Jun;27(6):545-52. doi: 10.1002/humu.20335. Hum Mutat. 2006. PMID: 16671097

10

Regulation of gene expression in the mammalian eye and its relevance to eye disease.

Scheetz TE, Kim KY, Swiderski RE, Philp AR, Braun TA, Knudtson KL, Dorrance AM, DiBona GF, Huang J, Casavant TL, Sheffield VC, Stone EM. Scheetz TE, et al. Among authors: braun ta. Proc Natl Acad Sci U S A. 2006 Sep 26;103(39):14429-34. doi: 10.1073/pnas.0602562103. Epub 2006 Sep 18. Proc Natl Acad Sci U S A. 2006. PMID: 16983098 Free PMC article.

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