Miao Y - Search Results

1

G-Protein-Coupled Receptor-Membrane Interactions Depend on the Receptor Activation State.

Bhattarai A, Wang J, Miao Y. Bhattarai A, et al. Among authors: miao y. J Comput Chem. 2020 Feb 15;41(5):460-471. doi: 10.1002/jcc.26082. Epub 2019 Oct 10. J Comput Chem. 2020. PMID: 31602675 Free PMC article.

2

Accelerated molecular dynamics simulations of protein folding.

Miao Y, Feixas F, Eun C, McCammon JA. Miao Y, et al. J Comput Chem. 2015 Jul 30;36(20):1536-49. doi: 10.1002/jcc.23964. Epub 2015 Jun 12. J Comput Chem. 2015. PMID: 26096263 Free PMC article.

3

Ligand Binding Pathways and Conformational Transitions of the HIV Protease.

Miao Y, Huang YM, Walker RC, McCammon JA, Chang CA. Miao Y, et al. Biochemistry. 2018 Mar 6;57(9):1533-1541. doi: 10.1021/acs.biochem.7b01248. Epub 2018 Feb 15. Biochemistry. 2018. PMID: 29394043 Free PMC article.

4

Mechanism of the G-protein mimetic nanobody binding to a muscarinic G-protein-coupled receptor.

Miao Y, McCammon JA. Miao Y, et al. Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):3036-3041. doi: 10.1073/pnas.1800756115. Epub 2018 Mar 5. Proc Natl Acad Sci U S A. 2018. PMID: 29507218 Free PMC article.

5

Acceleration of biomolecular kinetics in Gaussian accelerated molecular dynamics.

Miao Y. Miao Y. J Chem Phys. 2018 Aug 21;149(7):072308. doi: 10.1063/1.5024217. J Chem Phys. 2018. PMID: 30134710 Free PMC article.

6

Gaussian accelerated molecular dynamics for elucidation of drug pathways.

Bhattarai A, Miao Y. Bhattarai A, et al. Among authors: miao y. Expert Opin Drug Discov. 2018 Nov;13(11):1055-1065. doi: 10.1080/17460441.2018.1538207. Epub 2018 Oct 29. Expert Opin Drug Discov. 2018. PMID: 30371112 Free PMC article. Review.

7

Structural Basis for Binding of Allosteric Drug Leads in the Adenosine A₁ Receptor.

Miao Y, Bhattarai A, Nguyen ATN, Christopoulos A, May LT. Miao Y, et al. Sci Rep. 2018 Nov 15;8(1):16836. doi: 10.1038/s41598-018-35266-x. Sci Rep. 2018. PMID: 30442899 Free PMC article.

8

Recent advances in computational studies of GPCR-G protein interactions.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. Adv Protein Chem Struct Biol. 2019;116:397-419. doi: 10.1016/bs.apcsb.2018.11.011. Epub 2019 Jan 3. Adv Protein Chem Struct Biol. 2019. PMID: 31036298 Free PMC article. Review.

9

Mechanistic Insights into Specific G Protein Interactions with Adenosine Receptors.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. J Phys Chem B. 2019 Aug 1;123(30):6462-6473. doi: 10.1021/acs.jpcb.9b04867. Epub 2019 Jul 22. J Phys Chem B. 2019. PMID: 31283874 Free PMC article.

10

Improved Modeling of Peptide-Protein Binding Through Global Docking and Accelerated Molecular Dynamics Simulations.

Wang J, Alekseenko A, Kozakov D, Miao Y. Wang J, et al. Among authors: miao y. Front Mol Biosci. 2019 Oct 30;6:112. doi: 10.3389/fmolb.2019.00112. eCollection 2019. Front Mol Biosci. 2019. PMID: 31737642 Free PMC article.

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