Navin N - Search Results

1

SCMarker: Ab initio marker selection for single cell transcriptome profiling.

Wang F, Liang S, Kumar T, Navin N, Chen K. Wang F, et al. Among authors: navin n. PLoS Comput Biol. 2019 Oct 28;15(10):e1007445. doi: 10.1371/journal.pcbi.1007445. eCollection 2019 Oct. PLoS Comput Biol. 2019. PMID: 31658262 Free PMC article.

2

Monovar: single-nucleotide variant detection in single cells.

Zafar H, Wang Y, Nakhleh L, Navin N, Chen K. Zafar H, et al. Among authors: navin n. Nat Methods. 2016 Jun;13(6):505-7. doi: 10.1038/nmeth.3835. Epub 2016 Apr 18. Nat Methods. 2016. PMID: 27088313 Free PMC article.

3

Genotyping tumor clones from single-cell data.

Navin NE, Chen K. Navin NE, et al. Nat Methods. 2016 Jun 29;13(7):555-6. doi: 10.1038/nmeth.3903. Nat Methods. 2016. PMID: 27355792 No abstract available.

4

Single-cell analysis at the threshold.

Chen X, Love JC, Navin NE, Pachter L, Stubbington MJ, Svensson V, Sweedler JV, Teichmann SA. Chen X, et al. Nat Biotechnol. 2016 Nov 8;34(11):1111-1118. doi: 10.1038/nbt.3721. Nat Biotechnol. 2016. PMID: 27824834 No abstract available.

5

Nanogrid single-nucleus RNA sequencing reveals phenotypic diversity in breast cancer.

Gao R, Kim C, Sei E, Foukakis T, Crosetto N, Chan LK, Srinivasan M, Zhang H, Meric-Bernstam F, Navin N. Gao R, et al. Among authors: navin n. Nat Commun. 2017 Aug 9;8(1):228. doi: 10.1038/s41467-017-00244-w. Nat Commun. 2017. PMID: 28794488 Free PMC article.

6

SiFit: inferring tumor trees from single-cell sequencing data under finite-sites models.

Zafar H, Tzen A, Navin N, Chen K, Nakhleh L. Zafar H, et al. Among authors: navin n. Genome Biol. 2017 Sep 19;18(1):178. doi: 10.1186/s13059-017-1311-2. Genome Biol. 2017. PMID: 28927434 Free PMC article.

7

Chemoresistance Evolution in Triple-Negative Breast Cancer Delineated by Single-Cell Sequencing.

Kim C, Gao R, Sei E, Brandt R, Hartman J, Hatschek T, Crosetto N, Foukakis T, Navin NE. Kim C, et al. Among authors: navin ne. Cell. 2018 May 3;173(4):879-893.e13. doi: 10.1016/j.cell.2018.03.041. Epub 2018 Apr 19. Cell. 2018. PMID: 29681456 Free PMC article.

8

Comments on the model parameters in "SiFit: inferring tumor trees from single-cell sequencing data under finite-sites models".

Zafar H, Tzen A, Navin N, Chen K, Nakhleh L. Zafar H, et al. Among authors: navin n. Genome Biol. 2019 May 16;20(1):95. doi: 10.1186/s13059-019-1692-5. Genome Biol. 2019. PMID: 31096998 Free PMC article. No abstract available.

9

SiCloneFit: Bayesian inference of population structure, genotype, and phylogeny of tumor clones from single-cell genome sequencing data.

Zafar H, Navin N, Chen K, Nakhleh L. Zafar H, et al. Among authors: navin n. Genome Res. 2019 Nov;29(11):1847-1859. doi: 10.1101/gr.243121.118. Epub 2019 Oct 18. Genome Res. 2019. PMID: 31628257 Free PMC article.

10

SCOPIT: sample size calculations for single-cell sequencing experiments.

Davis A, Gao R, Navin NE. Davis A, et al. BMC Bioinformatics. 2019 Nov 12;20(1):566. doi: 10.1186/s12859-019-3167-9. BMC Bioinformatics. 2019. PMID: 31718533 Free PMC article.

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