Borenstein E - Search Results

1

Human gut bacteria contain acquired interbacterial defence systems.

Ross BD, Verster AJ, Radey MC, Schmidtke DT, Pope CE, Hoffman LR, Hajjar AM, Peterson SB, Borenstein E, Mougous JD. Ross BD, et al. Among authors: borenstein e. Nature. 2019 Nov;575(7781):224-228. doi: 10.1038/s41586-019-1708-z. Epub 2019 Oct 30. Nature. 2019. PMID: 31666699 Free PMC article.

2

Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease.

Greenblum S, Turnbaugh PJ, Borenstein E. Greenblum S, et al. Among authors: borenstein e. Proc Natl Acad Sci U S A. 2012 Jan 10;109(2):594-9. doi: 10.1073/pnas.1116053109. Epub 2011 Dec 19. Proc Natl Acad Sci U S A. 2012. PMID: 22184244 Free PMC article.

3

Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.

O'Roak BJ, Vives L, Girirajan S, Karakoc E, Krumm N, Coe BP, Levy R, Ko A, Lee C, Smith JD, Turner EH, Stanaway IB, Vernot B, Malig M, Baker C, Reilly B, Akey JM, Borenstein E, Rieder MJ, Nickerson DA, Bernier R, Shendure J, Eichler EE. O'Roak BJ, et al. Among authors: borenstein e. Nature. 2012 Apr 4;485(7397):246-50. doi: 10.1038/nature10989. Nature. 2012. PMID: 22495309 Free PMC article.

4

Towards a predictive systems-level model of the human microbiome: progress, challenges, and opportunities.

Greenblum S, Chiu HC, Levy R, Carr R, Borenstein E. Greenblum S, et al. Among authors: borenstein e. Curr Opin Biotechnol. 2013 Aug;24(4):810-20. doi: 10.1016/j.copbio.2013.04.001. Epub 2013 Apr 23. Curr Opin Biotechnol. 2013. PMID: 23623295 Free PMC article. Review.

5

Escherichia coli dysbiosis correlates with gastrointestinal dysfunction in children with cystic fibrosis.

Hoffman LR, Pope CE, Hayden HS, Heltshe S, Levy R, McNamara S, Jacobs MA, Rohmer L, Radey M, Ramsey BW, Brittnacher MJ, Borenstein E, Miller SI. Hoffman LR, et al. Among authors: borenstein e. Clin Infect Dis. 2014 Feb;58(3):396-9. doi: 10.1093/cid/cit715. Epub 2013 Oct 30. Clin Infect Dis. 2014. PMID: 24178246 Free PMC article.

6

Extensive strain-level copy-number variation across human gut microbiome species.

Greenblum S, Carr R, Borenstein E. Greenblum S, et al. Among authors: borenstein e. Cell. 2015 Feb 12;160(4):583-594. doi: 10.1016/j.cell.2014.12.038. Epub 2015 Jan 29. Cell. 2015. PMID: 25640238 Free PMC article.

7

Metagenomic evidence for taxonomic dysbiosis and functional imbalance in the gastrointestinal tracts of children with cystic fibrosis.

Manor O, Levy R, Pope CE, Hayden HS, Brittnacher MJ, Carr R, Radey MC, Hager KR, Heltshe SL, Ramsey BW, Miller SI, Hoffman LR, Borenstein E. Manor O, et al. Among authors: borenstein e. Sci Rep. 2016 Mar 4;6:22493. doi: 10.1038/srep22493. Sci Rep. 2016. PMID: 26940651 Free PMC article.

8

Influence of early life exposure, host genetics and diet on the mouse gut microbiome and metabolome.

Snijders AM, Langley SA, Kim YM, Brislawn CJ, Noecker C, Zink EM, Fansler SJ, Casey CP, Miller DR, Huang Y, Karpen GH, Celniker SE, Brown JB, Borenstein E, Jansson JK, Metz TO, Mao JH. Snijders AM, et al. Among authors: borenstein e. Nat Microbiol. 2016 Nov 28;2:16221. doi: 10.1038/nmicrobiol.2016.221. Nat Microbiol. 2016. PMID: 27892936

9

Revised computational metagenomic processing uncovers hidden and biologically meaningful functional variation in the human microbiome.

Manor O, Borenstein E. Manor O, et al. Among authors: borenstein e. Microbiome. 2017 Feb 8;5(1):19. doi: 10.1186/s40168-017-0231-4. Microbiome. 2017. PMID: 28179006 Free PMC article.

10

A broadly distributed toxin family mediates contact-dependent antagonism between gram-positive bacteria.

Whitney JC, Peterson SB, Kim J, Pazos M, Verster AJ, Radey MC, Kulasekara HD, Ching MQ, Bullen NP, Bryant D, Goo YA, Surette MG, Borenstein E, Vollmer W, Mougous JD. Whitney JC, et al. Among authors: borenstein e. Elife. 2017 Jul 11;6:e26938. doi: 10.7554/eLife.26938. Elife. 2017. PMID: 28696203 Free PMC article.

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