Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

3,175 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Publication Date timeline is not available.
Page 1
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.
Davis JJ, Wattam AR, Aziz RK, Brettin T, Butler R, Butler RM, Chlenski P, Conrad N, Dickerman A, Dietrich EM, Gabbard JL, Gerdes S, Guard A, Kenyon RW, Machi D, Mao C, Murphy-Olson D, Nguyen M, Nordberg EK, Olsen GJ, Olson RD, Overbeek JC, Overbeek R, Parrello B, Pusch GD, Shukla M, Thomas C, VanOeffelen M, Vonstein V, Warren AS, Xia F, Xie D, Yoo H, Stevens R. Davis JJ, et al. Among authors: stevens r. Nucleic Acids Res. 2020 Jan 8;48(D1):D606-D612. doi: 10.1093/nar/gkz943. Nucleic Acids Res. 2020. PMID: 31667520 Free PMC article.
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes.
Overbeek R, Begley T, Butler RM, Choudhuri JV, Chuang HY, Cohoon M, de Crécy-Lagard V, Diaz N, Disz T, Edwards R, Fonstein M, Frank ED, Gerdes S, Glass EM, Goesmann A, Hanson A, Iwata-Reuyl D, Jensen R, Jamshidi N, Krause L, Kubal M, Larsen N, Linke B, McHardy AC, Meyer F, Neuweger H, Olsen G, Olson R, Osterman A, Portnoy V, Pusch GD, Rodionov DA, Rückert C, Steiner J, Stevens R, Thiele I, Vassieva O, Ye Y, Zagnitko O, Vonstein V. Overbeek R, et al. Among authors: stevens r. Nucleic Acids Res. 2005 Oct 7;33(17):5691-702. doi: 10.1093/nar/gki866. Print 2005. Nucleic Acids Res. 2005. PMID: 16214803 Free PMC article.
Essential genes on metabolic maps.
Gerdes S, Edwards R, Kubal M, Fonstein M, Stevens R, Osterman A. Gerdes S, et al. Among authors: stevens r. Curr Opin Biotechnol. 2006 Oct;17(5):448-56. doi: 10.1016/j.copbio.2006.08.006. Epub 2006 Sep 15. Curr Opin Biotechnol. 2006. PMID: 16978855 Review.
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation.
McNeil LK, Reich C, Aziz RK, Bartels D, Cohoon M, Disz T, Edwards RA, Gerdes S, Hwang K, Kubal M, Margaryan GR, Meyer F, Mihalo W, Olsen GJ, Olson R, Osterman A, Paarmann D, Paczian T, Parrello B, Pusch GD, Rodionov DA, Shi X, Vassieva O, Vonstein V, Zagnitko O, Xia F, Zinner J, Overbeek R, Stevens R. McNeil LK, et al. Among authors: stevens r. Nucleic Acids Res. 2007 Jan;35(Database issue):D347-53. doi: 10.1093/nar/gkl947. Epub 2006 Dec 1. Nucleic Acids Res. 2007. PMID: 17145713 Free PMC article.
The RAST Server: rapid annotations using subsystems technology.
Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. Aziz RK, et al. Among authors: stevens r. BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75. BMC Genomics. 2008. PMID: 18261238 Free PMC article.
Building the blueprint of life.
Henry C, Overbeek R, Stevens RL. Henry C, et al. Among authors: stevens rl. Biotechnol J. 2010 Jul;5(7):695-704. doi: 10.1002/biot.201000076. Biotechnol J. 2010. PMID: 20665643 Review.
Connecting genotype to phenotype in the era of high-throughput sequencing.
Henry CS, Overbeek R, Xia F, Best AA, Glass E, Gilbert J, Larsen P, Edwards R, Disz T, Meyer F, Vonstein V, Dejongh M, Bartels D, Desai N, D'Souza M, Devoid S, Keegan KP, Olson R, Wilke A, Wilkening J, Stevens RL. Henry CS, et al. Among authors: stevens rl. Biochim Biophys Acta. 2011 Oct;1810(10):967-77. doi: 10.1016/j.bbagen.2011.03.010. Epub 2011 Mar 21. Biochim Biophys Acta. 2011. PMID: 21421023 Review.
Real time metagenomics: using k-mers to annotate metagenomes.
Edwards RA, Olson R, Disz T, Pusch GD, Vonstein V, Stevens R, Overbeek R. Edwards RA, et al. Among authors: stevens r. Bioinformatics. 2012 Dec 15;28(24):3316-7. doi: 10.1093/bioinformatics/bts599. Epub 2012 Oct 9. Bioinformatics. 2012. PMID: 23047562 Free PMC article.
3,175 results