Liao X - Search Results

1

Discriminant Projection Shared Dictionary Learning for Classification of Tumors Using Gene Expression Data.

Peng S, Yang Y, Liu W, Li F, Liao X. Peng S, et al. Among authors: liao x. IEEE/ACM Trans Comput Biol Bioinform. 2021 Jul-Aug;18(4):1464-1473. doi: 10.1109/TCBB.2019.2950209. Epub 2021 Aug 6. IEEE/ACM Trans Comput Biol Bioinform. 2021. PMID: 31675339

2

High-Scalable Collaborated Parallel Framework for Large-Scale Molecular Dynamic Simulation on Tianhe-2 Supercomputer.

Peng S, Zhang X, Su W, Dong D, Lu Y, Liao X, Lu K, Yang C, Liu J, Zhu W, Wei D. Peng S, et al. Among authors: liao x. IEEE/ACM Trans Comput Biol Bioinform. 2020 May-Jun;17(3):804-816. doi: 10.1109/TCBB.2018.2805709. Epub 2018 Feb 13. IEEE/ACM Trans Comput Biol Bioinform. 2020. PMID: 29994638

3

COPCOP: A Novel Algorithm and Parallel Optimization Framework for Co-Evolutionary Domain Detection.

Zhang X, Liao X, Zhu H, Li K, Shi B, Peng S. Zhang X, et al. Among authors: liao x. IEEE/ACM Trans Comput Biol Bioinform. 2018 Oct 30. doi: 10.1109/TCBB.2018.2878701. Online ahead of print. IEEE/ACM Trans Comput Biol Bioinform. 2018. PMID: 30387739

4

Multiple Sequence Alignment Based on a Suffix Tree and Center-Star Strategy: A Linear Method for Multiple Nucleotide Sequence Alignment on Spark Parallel Framework.

Su W, Liao X, Lu Y, Zou Q, Peng S. Su W, et al. Among authors: liao x. J Comput Biol. 2017 Dec;24(12):1230-1242. doi: 10.1089/cmb.2017.0040. Epub 2017 Nov 8. J Comput Biol. 2017. PMID: 29116822

5

Deep learning in omics: a survey and guideline.

Zhang Z, Zhao Y, Liao X, Shi W, Li K, Zou Q, Peng S. Zhang Z, et al. Among authors: liao x. Brief Funct Genomics. 2019 Feb 14;18(1):41-57. doi: 10.1093/bfgp/ely030. Brief Funct Genomics. 2019. PMID: 30265280 Review.

6

A Hybrid Parallel Strategy Based on String Graph Theory to Improve De Novo DNA Assembly on the TianHe-2 Supercomputer.

Zhang F, Liao X, Peng S, Cui Y, Wang B, Zhu X, Liu J. Zhang F, et al. Among authors: liao x. Interdiscip Sci. 2016 Jun;8(2):169-176. doi: 10.1007/s12539-015-0127-6. Epub 2015 Sep 24. Interdiscip Sci. 2016. PMID: 26403255

7

Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture.

Peng S, Cheng M, Huang K, Cui Y, Zhang Z, Guo R, Zhang X, Yang S, Liao X, Lu Y, Zou Q, Shi B. Peng S, et al. Among authors: liao x. BMC Bioinformatics. 2018 Aug 13;19(Suppl 9):282. doi: 10.1186/s12859-018-2276-1. BMC Bioinformatics. 2018. PMID: 30367570 Free PMC article.

8

MinimapR: A parallel alignment tool for the analysis of large-scale third-generation sequencing data.

Wang Z, Cui Y, Peng S, Liao X, Yu Y. Wang Z, et al. Among authors: liao x. Comput Biol Chem. 2022 Aug;99:107735. doi: 10.1016/j.compbiolchem.2022.107735. Epub 2022 Jul 13. Comput Biol Chem. 2022. PMID: 35850048

9

cmFSM: a scalable CPU-MIC coordinated drug-finding tool by frequent subgraph mining.

Yang S, Guo R, Liu R, Liao X, Zou Q, Shi B, Peng S. Yang S, et al. Among authors: liao x. BMC Bioinformatics. 2018 May 8;19(Suppl 4):98. doi: 10.1186/s12859-018-2071-z. BMC Bioinformatics. 2018. PMID: 29745832 Free PMC article.

10

P-Hint-Hunt: a deep parallelized whole genome DNA methylation detection tool.

Peng S, Yang S, Gao M, Liao X, Liu J, Yang C, Wu C, Yu W. Peng S, et al. Among authors: liao x. BMC Genomics. 2017 Mar 14;18(Suppl 2):134. doi: 10.1186/s12864-017-3497-9. BMC Genomics. 2017. PMID: 28361696 Free PMC article.

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