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945 results

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Page 1
Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens.
Saha S, Ramesh A, Kalantar K, Malaker R, Hasanuzzaman M, Khan LM, Mayday MY, Sajib MSI, Li LM, Langelier C, Rahman H, Crawford ED, Tato CM, Islam M, Juan YF, de Bourcy C, Dimitrov B, Wang J, Tang J, Sheu J, Egger R, De Carvalho TR, Wilson MR, Saha SK, DeRisi JL. Saha S, et al. Among authors: li lm. mBio. 2019 Dec 17;10(6):e02877-19. doi: 10.1128/mBio.02877-19. mBio. 2019. PMID: 31848287 Free PMC article.
Investigating Transfusion-related Sepsis Using Culture-Independent Metagenomic Sequencing.
Crawford E, Kamm J, Miller S, Li LM, Caldera S, Lyden A, Yokoe D, Nichols A, Tran NK, Barnard SE, Conner PM, Nambiar A, Zinter MS, Moayeri M, Serpa PH, Prince BC, Quan J, Sit R, Tan M, Phelps M, Derisi JL, Tato CM, Langelier C. Crawford E, et al. Among authors: li lm. Clin Infect Dis. 2020 Aug 22;71(5):1179-1185. doi: 10.1093/cid/ciz960. Clin Infect Dis. 2020. PMID: 31563940 Free PMC article.
Sentinel Case of Candida auris in the Western United States Following Prolonged Occult Colonization in a Returned Traveler from India.
Woodworth MH, Dynerman D, Crawford ED, Doernberg SB, Ramirez-Avila L, Serpa PH, Nichols A, Li LM, Lyden A, Tato CM, Miller S, Derisi JL, Langelier C. Woodworth MH, et al. Among authors: li lm. Microb Drug Resist. 2019 Jun;25(5):677-680. doi: 10.1089/mdr.2018.0408. Microb Drug Resist. 2019. PMID: 31163013 Free PMC article.
Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19.
Shah SJ, Barish PN, Prasad PA, Kistler A, Neff N, Kamm J, Li LM, Chiu CY, Babik JM, Fang MC, Abe-Jones Y, Alipanah N, Alvarez FN, Botvinnik OB, Castaneda G; CZB CLIAhub Consortium; Dadasovich RM, Davis J, Deng X, DeRisi JL, Detweiler AM, Federman S, Haliburton J, Hao S, Kerkhoff AD, Kumar GR, Malcolm KB, Mann SA, Martinez S, Mary RK, Mick E, Mwakibete L, Najafi N, Peluso MJ, Phelps M, Pisco AO, Ratnasiri K, Rubio LA, Sellas A, Sherwood KD, Sheu J, Spottiswoode N, Tan M, Yu G, Kangelaris KN, Langelier C. Shah SJ, et al. Among authors: li lm. EClinicalMedicine. 2020 Oct;27:100518. doi: 10.1016/j.eclinm.2020.100518. Epub 2020 Aug 26. EClinicalMedicine. 2020. PMID: 32864588 Free PMC article.
Genomic Epidemiology and Transmission Dynamics of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Congregate Healthcare Facilities in Santa Clara County, California.
MacCannell T, Batson J, Bonin B, Astha KC, Quenelle R, Strong B, Lin W, Rudman SL, Dynerman D, Ayscue P, Han G, Kistler A, Villarino ME; Chan Zuckerberg Biohub COVIDTracker Consortium and the Santa Clara County Public Health Department’s Special Investgations Group. MacCannell T, et al. Clin Infect Dis. 2022 Mar 9;74(5):829-835. doi: 10.1093/cid/ciab553. Clin Infect Dis. 2022. PMID: 34328176 Free PMC article.
Prolonged silent carriage, genomic virulence potential and transmission between staff and patients characterize a neonatal intensive care unit (NICU) outbreak of methicillin-resistant Staphylococcus aureus (MRSA).
Madera S, McNeil N, Serpa PH, Kamm J, Pak C, Caughell C, Nichols A, Dynerman D, Li LM, Sanchez-Guerrero E, Phelps MS, Detweiler AM, Neff N, Reyes H, Miller SA, Yokoe DS, DeRisi JL, Ramirez-Avila L, Langelier CR. Madera S, et al. Among authors: li lm. Infect Control Hosp Epidemiol. 2023 Jan;44(1):40-46. doi: 10.1017/ice.2022.48. Epub 2022 Mar 21. Infect Control Hosp Epidemiol. 2023. PMID: 35311638
Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses.
Mick E, Kamm J, Pisco AO, Ratnasiri K, Babik JM, Castañeda G, DeRisi JL, Detweiler AM, Hao SL, Kangelaris KN, Kumar GR, Li LM, Mann SA, Neff N, Prasad PA, Serpa PH, Shah SJ, Spottiswoode N, Tan M, Calfee CS, Christenson SA, Kistler A, Langelier C. Mick E, et al. Among authors: li lm. Nat Commun. 2020 Nov 17;11(1):5854. doi: 10.1038/s41467-020-19587-y. Nat Commun. 2020. PMID: 33203890 Free PMC article.
Bergeyella cardium: Clinical Characteristics and Draft Genome of an Emerging Pathogen in Native and Prosthetic Valve Endocarditis.
Mulliken JS, Langelier C, Budak JZ, Miller S, Dynerman D, Hao S, Li LM, Crawford E, Lyden A, Woodworth MH, DeRisi JL, Desmond E, Browne C, Luu A, Grandis DJ, Grossman W, Deuse T, Melcher GP. Mulliken JS, et al. Among authors: li lm. Open Forum Infect Dis. 2019 Mar 15;6(4):ofz134. doi: 10.1093/ofid/ofz134. eCollection 2019 Apr. Open Forum Infect Dis. 2019. PMID: 31024974 Free PMC article.
Upper airway gene expression differentiates COVID-19 from other acute respiratory illnesses and reveals suppression of innate immune responses by SARS-CoV-2.
Mick E, Kamm J, Pisco AO, Ratnasiri K, Babik JM, Calfee CS, Castañeda G, DeRisi JL, Detweiler AM, Hao S, Kangelaris KN, Kumar GR, Li LM, Mann SA, Neff N, Prasad PA, Serpa PH, Shah SJ, Spottiswoode N, Tan M, Christenson SA, Kistler A, Langelier C. Mick E, et al. Among authors: li lm. medRxiv [Preprint]. 2020 May 19:2020.05.18.20105171. doi: 10.1101/2020.05.18.20105171. medRxiv. 2020. Update in: Nat Commun. 2020 Nov 17;11(1):5854. doi: 10.1038/s41467-020-19587-y PMID: 32511476 Free PMC article. Updated. Preprint.
Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children.
Mick E, Tsitsiklis A, Spottiswoode N, Caldera S, Serpa PH, Detweiler AM, Neff N, Pisco AO, Li LM, Retallack H, Ratnasiri K, Williamson KM, Soesanto V, Simões EAF, Smith C, Abuogi L, Kistler A, Wagner BD, DeRisi JL, Ambroggio L, Mourani PM, Langelier CR. Mick E, et al. Among authors: li lm. Nat Commun. 2022 Jul 8;13(1):3937. doi: 10.1038/s41467-022-31600-0. Nat Commun. 2022. PMID: 35803954 Free PMC article.
945 results