Morris Q - Search Results

1

A community effort to create standards for evaluating tumor subclonal reconstruction.

Salcedo A, Tarabichi M, Espiritu SMG, Deshwar AG, David M, Wilson NM, Dentro S, Wintersinger JA, Liu LY, Ko M, Sivanandan S, Zhang H, Zhu K, Ou Yang TH, Chilton JM, Buchanan A, Lalansingh CM, P'ng C, Anghel CV, Umar I, Lo B, Zou W; DREAM SMC-Het Participants; Simpson JT, Stuart JM, Anastassiou D, Guan Y, Ewing AD, Ellrott K, Wedge DC, Morris Q, Van Loo P, Boutros PC. Salcedo A, et al. Among authors: morris q. Nat Biotechnol. 2020 Jan;38(1):97-107. doi: 10.1038/s41587-019-0364-z. Epub 2020 Jan 9. Nat Biotechnol. 2020. PMID: 31919445 Free PMC article.

2

Unsupervised detection of genes of influence in lung cancer using biological networks.

Goldenberg A, Mostafavi S, Quon G, Boutros PC, Morris QD. Goldenberg A, et al. Bioinformatics. 2011 Nov 15;27(22):3166-72. doi: 10.1093/bioinformatics/btr533. Epub 2011 Sep 28. Bioinformatics. 2011. PMID: 21965819

3

Evaluation of methods for modeling transcription factor sequence specificity.

Weirauch MT, Cote A, Norel R, Annala M, Zhao Y, Riley TR, Saez-Rodriguez J, Cokelaer T, Vedenko A, Talukder S; DREAM5 Consortium; Bussemaker HJ, Morris QD, Bulyk ML, Stolovitzky G, Hughes TR. Weirauch MT, et al. Nat Biotechnol. 2013 Feb;31(2):126-34. doi: 10.1038/nbt.2486. Epub 2013 Jan 27. Nat Biotechnol. 2013. PMID: 23354101 Free PMC article.

4

Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction.

Quon G, Haider S, Deshwar AG, Cui A, Boutros PC, Morris Q. Quon G, et al. Among authors: morris q. Genome Med. 2013 Mar 28;5(3):29. doi: 10.1186/gm433. Genome Med. 2013. PMID: 23537167 Free PMC article.

5

Identifying cancer specific functionally relevant miRNAs from gene expression and miRNA-to-gene networks using regularized regression.

Mezlini AM, Wang B, Deshwar A, Morris Q, Goldenberg A. Mezlini AM, et al. Among authors: morris q. PLoS One. 2013 Oct 2;8(10):e73168. doi: 10.1371/journal.pone.0073168. eCollection 2013. PLoS One. 2013. PMID: 24098326 Free PMC article.

6

PLIDA: cross-platform gene expression normalization using perturbed topic models.

Deshwar AG, Morris Q. Deshwar AG, et al. Among authors: morris q. Bioinformatics. 2014 Apr 1;30(7):956-61. doi: 10.1093/bioinformatics/btt574. Epub 2013 Oct 11. Bioinformatics. 2014. PMID: 24123674

7

Inferring clonal evolution of tumors from single nucleotide somatic mutations.

Jiao W, Vembu S, Deshwar AG, Stein L, Morris Q. Jiao W, et al. Among authors: morris q. BMC Bioinformatics. 2014 Feb 1;15:35. doi: 10.1186/1471-2105-15-35. BMC Bioinformatics. 2014. PMID: 24484323 Free PMC article.

8

Comparing nonparametric Bayesian tree priors for clonal reconstruction of tumors.

Deshwar AG, Vembu S, Morris Q. Deshwar AG, et al. Among authors: morris q. Pac Symp Biocomput. 2015:20-31. Pac Symp Biocomput. 2015. PMID: 25592565 Free article.

9

PhyloWGS: reconstructing subclonal composition and evolution from whole-genome sequencing of tumors.

Deshwar AG, Vembu S, Yung CK, Jang GH, Stein L, Morris Q. Deshwar AG, et al. Among authors: morris q. Genome Biol. 2015 Feb 13;16(1):35. doi: 10.1186/s13059-015-0602-8. Genome Biol. 2015. PMID: 25786235 Free PMC article.

10

ISOpureR: an R implementation of a computational purification algorithm of mixed tumour profiles.

Anghel CV, Quon G, Haider S, Nguyen F, Deshwar AG, Morris QD, Boutros PC. Anghel CV, et al. BMC Bioinformatics. 2015 May 14;16:156. doi: 10.1186/s12859-015-0597-x. BMC Bioinformatics. 2015. PMID: 25972088 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

200 results

Search Page

Filters