Anastassiou D - Search Results

1

Characterizing Intra-Tumor Heterogeneity From Somatic Mutations Without Copy-Neutral Assumption.

Ogundijo OE, Zhu K, Wang X, Anastassiou D. Ogundijo OE, et al. Among authors: anastassiou d. IEEE/ACM Trans Comput Biol Bioinform. 2021 Nov-Dec;18(6):2271-2280. doi: 10.1109/TCBB.2020.2973635. Epub 2021 Dec 8. IEEE/ACM Trans Comput Biol Bioinform. 2021. PMID: 32070995

2

Bayesian basecalling for DNA sequence analysis using hidden Markov models.

Liang KC, Wang X, Anastassiou D. Liang KC, et al. Among authors: anastassiou d. IEEE/ACM Trans Comput Biol Bioinform. 2007 Jul-Sep;4(3):430-440. doi: 10.1109/tcbb.2007.1027. IEEE/ACM Trans Comput Biol Bioinform. 2007. PMID: 17666762

3

A profile-based deterministic sequential Monte Carlo algorithm for motif discovery.

Liang KC, Wang X, Anastassiou D. Liang KC, et al. Among authors: anastassiou d. Bioinformatics. 2008 Jan 1;24(1):46-55. doi: 10.1093/bioinformatics/btm543. Epub 2007 Nov 17. Bioinformatics. 2008. PMID: 18024972

4

Identification of gene interactions associated with disease from gene expression data using synergy networks.

Watkinson J, Wang X, Zheng T, Anastassiou D. Watkinson J, et al. Among authors: anastassiou d. BMC Syst Biol. 2008 Jan 30;2:10. doi: 10.1186/1752-0509-2-10. BMC Syst Biol. 2008. PMID: 18234101 Free PMC article.

5

A haplotype inference algorithm for trios based on deterministic sampling.

Iliadis A, Watkinson J, Anastassiou D, Wang X. Iliadis A, et al. Among authors: anastassiou d. BMC Genet. 2010 Aug 23;11:78. doi: 10.1186/1471-2156-11-78. BMC Genet. 2010. PMID: 20727218 Free PMC article.

6

A unified framework for haplotype inference in nuclear families.

Iliadis A, Anastassiou D, Wang X. Iliadis A, et al. Among authors: anastassiou d. Ann Hum Genet. 2012 Jul;76(4):312-25. doi: 10.1111/j.1469-1809.2012.00715.x. Epub 2012 May 21. Ann Hum Genet. 2012. PMID: 22607042

7

Fast and accurate haplotype frequency estimation for large haplotype vectors from pooled DNA data.

Iliadis A, Anastassiou D, Wang X. Iliadis A, et al. Among authors: anastassiou d. BMC Genet. 2012 Oct 30;13:94. doi: 10.1186/1471-2156-13-94. BMC Genet. 2012. PMID: 23110720 Free PMC article.

8

Maximum-parsimony haplotype frequencies inference based on a joint constrained sparse representation of pooled DNA.

Jajamovich GH, Iliadis A, Anastassiou D, Wang X. Jajamovich GH, et al. Among authors: anastassiou d. BMC Bioinformatics. 2013 Sep 8;14:270. doi: 10.1186/1471-2105-14-270. BMC Bioinformatics. 2013. PMID: 24010487 Free PMC article.

9

A sequential Monte Carlo framework for haplotype inference in CNV/SNP genotype data.

Iliadis A, Anastassiou D, Wang X. Iliadis A, et al. Among authors: anastassiou d. EURASIP J Bioinform Syst Biol. 2014;2014(1):7. doi: 10.1186/1687-4153-2014-7. Epub 2014 Apr 24. EURASIP J Bioinform Syst Biol. 2014. PMID: 24868199 Free PMC article.

10

Discovering Genome-Wide Tag SNPs Based on the Mutual Information of the Variants.

Elmas A, Ou Yang TH, Wang X, Anastassiou D. Elmas A, et al. Among authors: anastassiou d. PLoS One. 2016 Dec 16;11(12):e0167994. doi: 10.1371/journal.pone.0167994. eCollection 2016. PLoS One. 2016. PMID: 27992465 Free PMC article.

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