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Page 1
Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals.
Wolff AM, Young ID, Sierra RG, Brewster AS, Martynowycz MW, Nango E, Sugahara M, Nakane T, Ito K, Aquila A, Bhowmick A, Biel JT, Carbajo S, Cohen AE, Cortez S, Gonzalez A, Hino T, Im D, Koralek JD, Kubo M, Lazarou TS, Nomura T, Owada S, Samelson AJ, Tanaka T, Tanaka R, Thompson EM, van den Bedem H, Woldeyes RA, Yumoto F, Zhao W, Tono K, Boutet S, Iwata S, Gonen T, Sauter NK, Fraser JS, Thompson MC. Wolff AM, et al. Among authors: nakane t. IUCrJ. 2020 Feb 26;7(Pt 2):306-323. doi: 10.1107/S205225252000072X. eCollection 2020 Mar 1. IUCrJ. 2020. PMID: 32148858 Free PMC article.
Native sulfur/chlorine SAD phasing for serial femtosecond crystallography.
Nakane T, Song C, Suzuki M, Nango E, Kobayashi J, Masuda T, Inoue S, Mizohata E, Nakatsu T, Tanaka T, Tanaka R, Shimamura T, Tono K, Joti Y, Kameshima T, Hatsui T, Yabashi M, Nureki O, Iwata S, Sugahara M. Nakane T, et al. Acta Crystallogr D Biol Crystallogr. 2015 Dec 1;71(Pt 12):2519-25. doi: 10.1107/S139900471501857X. Epub 2015 Nov 27. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 26627659 Free PMC article.
Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography.
Fukuda Y, Tse KM, Suzuki M, Diederichs K, Hirata K, Nakane T, Sugahara M, Nango E, Tono K, Joti Y, Kameshima T, Song C, Hatsui T, Yabashi M, Nureki O, Matsumura H, Inoue T, Iwata S, Mizohata E. Fukuda Y, et al. Among authors: nakane t. J Biochem. 2016 May;159(5):527-38. doi: 10.1093/jb/mvv133. Epub 2016 Jan 14. J Biochem. 2016. PMID: 26769972 Free PMC article.
Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography.
Fukuda Y, Tse KM, Nakane T, Nakatsu T, Suzuki M, Sugahara M, Inoue S, Masuda T, Yumoto F, Matsugaki N, Nango E, Tono K, Joti Y, Kameshima T, Song C, Hatsui T, Yabashi M, Nureki O, Murphy ME, Inoue T, Iwata S, Mizohata E. Fukuda Y, et al. Among authors: nakane t. Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):2928-33. doi: 10.1073/pnas.1517770113. Epub 2016 Feb 29. Proc Natl Acad Sci U S A. 2016. PMID: 26929369 Free PMC article.
Oil-free hyaluronic acid matrix for serial femtosecond crystallography.
Sugahara M, Song C, Suzuki M, Masuda T, Inoue S, Nakane T, Yumoto F, Nango E, Tanaka R, Tono K, Joti Y, Kameshima T, Hatsui T, Yabashi M, Nureki O, Numata K, Iwata S. Sugahara M, et al. Among authors: nakane t. Sci Rep. 2016 Apr 18;6:24484. doi: 10.1038/srep24484. Sci Rep. 2016. PMID: 27087008 Free PMC article.
Data processing pipeline for serial femtosecond crystallography at SACLA.
Nakane T, Joti Y, Tono K, Yabashi M, Nango E, Iwata S, Ishitani R, Nureki O. Nakane T, et al. J Appl Crystallogr. 2016 Apr 18;49(Pt 3):1035-1041. doi: 10.1107/S1600576716005720. eCollection 2016 Jun 1. J Appl Crystallogr. 2016. PMID: 27275146 Free PMC article.
The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography.
Edlund P, Takala H, Claesson E, Henry L, Dods R, Lehtivuori H, Panman M, Pande K, White T, Nakane T, Berntsson O, Gustavsson E, Båth P, Modi V, Roy-Chowdhury S, Zook J, Berntsen P, Pandey S, Poudyal I, Tenboer J, Kupitz C, Barty A, Fromme P, Koralek JD, Tanaka T, Spence J, Liang M, Hunter MS, Boutet S, Nango E, Moffat K, Groenhof G, Ihalainen J, Stojković EA, Schmidt M, Westenhoff S. Edlund P, et al. Among authors: nakane t. Sci Rep. 2016 Oct 19;6:35279. doi: 10.1038/srep35279. Sci Rep. 2016. PMID: 27756898 Free PMC article.
Membrane protein structure determination by SAD, SIR, or SIRAS phasing in serial femtosecond crystallography using an iododetergent.
Nakane T, Hanashima S, Suzuki M, Saiki H, Hayashi T, Kakinouchi K, Sugiyama S, Kawatake S, Matsuoka S, Matsumori N, Nango E, Kobayashi J, Shimamura T, Kimura K, Mori C, Kunishima N, Sugahara M, Takakyu Y, Inoue S, Masuda T, Hosaka T, Tono K, Joti Y, Kameshima T, Hatsui T, Yabashi M, Inoue T, Nureki O, Iwata S, Murata M, Mizohata E. Nakane T, et al. Proc Natl Acad Sci U S A. 2016 Nov 15;113(46):13039-13044. doi: 10.1073/pnas.1602531113. Epub 2016 Oct 31. Proc Natl Acad Sci U S A. 2016. PMID: 27799539 Free PMC article.
A three-dimensional movie of structural changes in bacteriorhodopsin.
Nango E, Royant A, Kubo M, Nakane T, Wickstrand C, Kimura T, Tanaka T, Tono K, Song C, Tanaka R, Arima T, Yamashita A, Kobayashi J, Hosaka T, Mizohata E, Nogly P, Sugahara M, Nam D, Nomura T, Shimamura T, Im D, Fujiwara T, Yamanaka Y, Jeon B, Nishizawa T, Oda K, Fukuda M, Andersson R, Båth P, Dods R, Davidsson J, Matsuoka S, Kawatake S, Murata M, Nureki O, Owada S, Kameshima T, Hatsui T, Joti Y, Schertler G, Yabashi M, Bondar AN, Standfuss J, Neutze R, Iwata S. Nango E, et al. Among authors: nakane t. Science. 2016 Dec 23;354(6319):1552-1557. doi: 10.1126/science.aah3497. Science. 2016. PMID: 28008064
Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Suga M, Akita F, Sugahara M, Kubo M, Nakajima Y, Nakane T, Yamashita K, Umena Y, Nakabayashi M, Yamane T, Nakano T, Suzuki M, Masuda T, Inoue S, Kimura T, Nomura T, Yonekura S, Yu LJ, Sakamoto T, Motomura T, Chen JH, Kato Y, Noguchi T, Tono K, Joti Y, Kameshima T, Hatsui T, Nango E, Tanaka R, Naitow H, Matsuura Y, Yamashita A, Yamamoto M, Nureki O, Yabashi M, Ishikawa T, Iwata S, Shen JR. Suga M, et al. Among authors: nakane t. Nature. 2017 Mar 2;543(7643):131-135. doi: 10.1038/nature21400. Epub 2017 Feb 20. Nature. 2017. PMID: 28219079 Free article.
468 results