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The importance of standards for sharing of computational models and data.
Poldrack RA, Feingold F, Frank MJ, Gleeson P, de Hollander G, Huys QJ, Love BC, Markiewicz CJ, Moran R, Ritter P, Rogers TT, Turner BM, Yarkoni T, Zhan M, Cohen JD. Poldrack RA, et al. Among authors: yarkoni t. Comput Brain Behav. 2019 Dec;2(3-4):229-232. doi: 10.1007/s42113-019-00062-x. Epub 2019 Oct 7. Comput Brain Behav. 2019. PMID: 32440654 Free PMC article.
Analysis of task-based functional MRI data preprocessed with fMRIPrep.
Esteban O, Ciric R, Finc K, Blair RW, Markiewicz CJ, Moodie CA, Kent JD, Goncalves M, DuPre E, Gomez DEP, Ye Z, Salo T, Valabregue R, Amlien IK, Liem F, Jacoby N, Stojić H, Cieslak M, Urchs S, Halchenko YO, Ghosh SS, De La Vega A, Yarkoni T, Wright J, Thompson WH, Poldrack RA, Gorgolewski KJ. Esteban O, et al. Among authors: yarkoni t. Nat Protoc. 2020 Jul;15(7):2186-2202. doi: 10.1038/s41596-020-0327-3. Epub 2020 Jun 8. Nat Protoc. 2020. PMID: 32514178 Free PMC article.
PyBIDS: Python tools for BIDS datasets.
Yarkoni T, Markiewicz CJ, de la Vega A, Gorgolewski KJ, Salo T, Halchenko YO, McNamara Q, DeStasio K, Poline JB, Petrov D, Hayot-Sasson V, Nielson DM, Carlin J, Kiar G, Whitaker K, DuPre E, Wagner A, Tirrell LS, Jas M, Hanke M, Poldrack RA, Esteban O, Appelhoff S, Holdgraf C, Staden I, Thirion B, Kleinschmidt DF, Lee JA, Visconti di Oleggio Castello M, Notter MP, Blair R. Yarkoni T, et al. J Open Source Softw. 2019;4(40):1294. doi: 10.21105/joss.01294. Epub 2019 Aug 12. J Open Source Softw. 2019. PMID: 32775955 Free PMC article. No abstract available.
Scanning the horizon: towards transparent and reproducible neuroimaging research.
Poldrack RA, Baker CI, Durnez J, Gorgolewski KJ, Matthews PM, Munafò MR, Nichols TE, Poline JB, Vul E, Yarkoni T. Poldrack RA, et al. Among authors: yarkoni t. Nat Rev Neurosci. 2017 Feb;18(2):115-126. doi: 10.1038/nrn.2016.167. Epub 2017 Jan 5. Nat Rev Neurosci. 2017. PMID: 28053326 Free PMC article. Review.
NeuroQuery, comprehensive meta-analysis of human brain mapping.
Dockès J, Poldrack RA, Primet R, Gözükan H, Yarkoni T, Suchanek F, Thirion B, Varoquaux G. Dockès J, et al. Among authors: yarkoni t. Elife. 2020 Mar 4;9:e53385. doi: 10.7554/eLife.53385. Elife. 2020. PMID: 32129761 Free PMC article.
62 results