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Synthesis Success Calculator: Predicting the Rapid Synthesis of DNA Fragments with Machine Learning.
ACS Synth Biol. 2020 Jul 17;9(7):1563-1571. doi: 10.1021/acssynbio.9b00460. Epub 2020 Jun 30.
ACS Synth Biol. 2020.
PMID: 32559378
Simultaneous repression of multiple bacterial genes using nonrepetitive extra-long sgRNA arrays.
Reis AC, Halper SM, Vezeau GE, Cetnar DP, Hossain A, Clauer PR, Salis HM.
Reis AC, et al. Among authors: halper sm.
Nat Biotechnol. 2019 Nov;37(11):1294-1301. doi: 10.1038/s41587-019-0286-9. Epub 2019 Oct 7.
Nat Biotechnol. 2019.
PMID: 31591552
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An Automated Pipeline for Engineering Many-Enzyme Pathways: Computational Sequence Design, Pathway Expression-Flux Mapping, and Scalable Pathway Optimization.
Halper SM, Cetnar DP, Salis HM.
Halper SM, et al.
Methods Mol Biol. 2018;1671:39-61. doi: 10.1007/978-1-4939-7295-1_4.
Methods Mol Biol. 2018.
PMID: 29170952
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Automated design of thousands of nonrepetitive parts for engineering stable genetic systems.
Hossain A, Lopez E, Halper SM, Cetnar DP, Reis AC, Strickland D, Klavins E, Salis HM.
Hossain A, et al. Among authors: halper sm.
Nat Biotechnol. 2020 Dec;38(12):1466-1475. doi: 10.1038/s41587-020-0584-2. Epub 2020 Jul 13.
Nat Biotechnol. 2020.
PMID: 32661437
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