Peters TJ - Search Results

1

Transient exposure to miR-203 enhances the differentiation capacity of established pluripotent stem cells.

Salazar-Roa M, Trakala M, Álvarez-Fernández M, Valdés-Mora F, Zhong C, Muñoz J, Yu Y, Peters TJ, Graña-Castro O, Serrano R, Zapatero-Solana E, Abad M, Bueno MJ, Gómez de Cedrón M, Fernández-Piqueras J, Serrano M, Blasco MA, Wang DZ, Clark SJ, Izpisua-Belmonte JC, Ortega S, Malumbres M. Salazar-Roa M, et al. Among authors: peters tj. EMBO J. 2020 Aug 17;39(16):e104324. doi: 10.15252/embj.2019104324. Epub 2020 Jul 2. EMBO J. 2020. PMID: 32614092 Free PMC article.

2

De novo identification of differentially methylated regions in the human genome.

Peters TJ, Buckley MJ, Statham AL, Pidsley R, Samaras K, V Lord R, Clark SJ, Molloy PL. Peters TJ, et al. Epigenetics Chromatin. 2015 Jan 27;8:6. doi: 10.1186/1756-8935-8-6. eCollection 2015. Epigenetics Chromatin. 2015. PMID: 25972926 Free PMC article.

3

Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.

Pidsley R, Zotenko E, Peters TJ, Lawrence MG, Risbridger GP, Molloy P, Van Djik S, Muhlhausler B, Stirzaker C, Clark SJ. Pidsley R, et al. Among authors: peters tj. Genome Biol. 2016 Oct 7;17(1):208. doi: 10.1186/s13059-016-1066-1. Genome Biol. 2016. PMID: 27717381 Free PMC article.

4

Enduring epigenetic landmarks define the cancer microenvironment.

Pidsley R, Lawrence MG, Zotenko E, Niranjan B, Statham A, Song J, Chabanon RM, Qu W, Wang H, Richards M, Nair SS, Armstrong NJ, Nim HT, Papargiris M, Balanathan P, French H, Peters T, Norden S, Ryan A, Pedersen J, Kench J, Daly RJ, Horvath LG, Stricker P, Frydenberg M, Taylor RA, Stirzaker C, Risbridger GP, Clark SJ. Pidsley R, et al. Genome Res. 2018 May;28(5):625-638. doi: 10.1101/gr.229070.117. Epub 2018 Apr 12. Genome Res. 2018. PMID: 29650553 Free PMC article.

5

Evaluation of cross-platform and interlaboratory concordance via consensus modelling of genomic measurements.

Peters TJ, French HJ, Bradford ST, Pidsley R, Stirzaker C, Varinli H, Nair S, Qu W, Song J, Giles KA, Statham AL, Speirs H, Speed TP, Clark SJ. Peters TJ, et al. Bioinformatics. 2019 Feb 15;35(4):560-570. doi: 10.1093/bioinformatics/bty675. Bioinformatics. 2019. PMID: 30084929 Free PMC article.

6

Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer.

Du Q, Bert SA, Armstrong NJ, Caldon CE, Song JZ, Nair SS, Gould CM, Luu PL, Peters T, Khoury A, Qu W, Zotenko E, Stirzaker C, Clark SJ. Du Q, et al. Nat Commun. 2019 Jan 24;10(1):416. doi: 10.1038/s41467-019-08302-1. Nat Commun. 2019. PMID: 30679435 Free PMC article.

7

Monozygotic twins and triplets discordant for amyotrophic lateral sclerosis display differential methylation and gene expression.

Tarr IS, McCann EP, Benyamin B, Peters TJ, Twine NA, Zhang KY, Zhao Q, Zhang ZH, Rowe DB, Nicholson GA, Bauer D, Clark SJ, Blair IP, Williams KL. Tarr IS, et al. Among authors: peters tj. Sci Rep. 2019 Jun 4;9(1):8254. doi: 10.1038/s41598-019-44765-4. Sci Rep. 2019. PMID: 31164693 Free PMC article.

8

Methylome and transcriptome maps of human visceral and subcutaneous adipocytes reveal key epigenetic differences at developmental genes.

Bradford ST, Nair SS, Statham AL, van Dijk SJ, Peters TJ, Anwar F, French HJ, von Martels JZH, Sutcliffe B, Maddugoda MP, Peranec M, Varinli H, Arnoldy R, Buckley M, Ross JP, Zotenko E, Song JZ, Stirzaker C, Bauer DC, Qu W, Swarbrick MM, Lutgers HL, Lord RV, Samaras K, Molloy PL, Clark SJ. Bradford ST, et al. Among authors: peters tj. Sci Rep. 2019 Jul 2;9(1):9511. doi: 10.1038/s41598-019-45777-w. Sci Rep. 2019. PMID: 31266983 Free PMC article.

9

Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.

Khoury A, Achinger-Kawecka J, Bert SA, Smith GC, French HJ, Luu PL, Peters TJ, Du Q, Parry AJ, Valdes-Mora F, Taberlay PC, Stirzaker C, Statham AL, Clark SJ. Khoury A, et al. Among authors: peters tj. Nat Commun. 2020 Jan 7;11(1):54. doi: 10.1038/s41467-019-13753-7. Nat Commun. 2020. PMID: 31911579 Free PMC article.

10

Calling differentially methylated regions from whole genome bisulphite sequencing with DMRcate.

Peters TJ, Buckley MJ, Chen Y, Smyth GK, Goodnow CC, Clark SJ. Peters TJ, et al. Nucleic Acids Res. 2021 Nov 8;49(19):e109. doi: 10.1093/nar/gkab637. Nucleic Acids Res. 2021. PMID: 34320181 Free PMC article.

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