Banfield JF - Search Results

1

A scoutRNA Is Required for Some Type V CRISPR-Cas Systems.

Harrington LB, Ma E, Chen JS, Witte IP, Gertz D, Paez-Espino D, Al-Shayeb B, Kyrpides NC, Burstein D, Banfield JF, Doudna JA. Harrington LB, et al. Among authors: banfield jf. Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Epub 2020 Jul 8. Mol Cell. 2020. PMID: 32645367 Free PMC article.

2

Strong bias in the bacterial CRISPR elements that confer immunity to phage.

Paez-Espino D, Morovic W, Sun CL, Thomas BC, Ueda K, Stahl B, Barrangou R, Banfield JF. Paez-Espino D, et al. Among authors: banfield jf. Nat Commun. 2013;4:1430. doi: 10.1038/ncomms2440. Nat Commun. 2013. PMID: 23385575 Free article.

3

Accurate, multi-kb reads resolve complex populations and detect rare microorganisms.

Sharon I, Kertesz M, Hug LA, Pushkarev D, Blauwkamp TA, Castelle CJ, Amirebrahimi M, Thomas BC, Burstein D, Tringe SG, Williams KH, Banfield JF. Sharon I, et al. Among authors: banfield jf. Genome Res. 2015 Apr;25(4):534-43. doi: 10.1101/gr.183012.114. Epub 2015 Feb 9. Genome Res. 2015. PMID: 25665577 Free PMC article.

4

CRISPR immunity drives rapid phage genome evolution in Streptococcus thermophilus.

Paez-Espino D, Sharon I, Morovic W, Stahl B, Thomas BC, Barrangou R, Banfield JF. Paez-Espino D, et al. Among authors: banfield jf. mBio. 2015 Apr 21;6(2):e00262-15. doi: 10.1128/mBio.00262-15. mBio. 2015. PMID: 25900652 Free PMC article.

5

Metagenomic reconstructions of bacterial CRISPR loci constrain population histories.

Sun CL, Thomas BC, Barrangou R, Banfield JF. Sun CL, et al. Among authors: banfield jf. ISME J. 2016 Apr;10(4):858-70. doi: 10.1038/ismej.2015.162. Epub 2015 Sep 22. ISME J. 2016. PMID: 26394009 Free PMC article.

6

Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems.

Burstein D, Sun CL, Brown CT, Sharon I, Anantharaman K, Probst AJ, Thomas BC, Banfield JF. Burstein D, et al. Among authors: banfield jf. Nat Commun. 2016 Feb 3;7:10613. doi: 10.1038/ncomms10613. Nat Commun. 2016. PMID: 26837824 Free PMC article.

7

Analysis of five complete genome sequences for members of the class Peribacteria in the recently recognized Peregrinibacteria bacterial phylum.

Anantharaman K, Brown CT, Burstein D, Castelle CJ, Probst AJ, Thomas BC, Williams KH, Banfield JF. Anantharaman K, et al. Among authors: banfield jf. PeerJ. 2016 Jan 28;4:e1607. doi: 10.7717/peerj.1607. eCollection 2016. PeerJ. 2016. PMID: 26844018 Free PMC article.

8

Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO₂ concentrations.

Probst AJ, Castelle CJ, Singh A, Brown CT, Anantharaman K, Sharon I, Hug LA, Burstein D, Emerson JB, Thomas BC, Banfield JF. Probst AJ, et al. Among authors: banfield jf. Environ Microbiol. 2017 Feb;19(2):459-474. doi: 10.1111/1462-2920.13362. Epub 2016 Jul 7. Environ Microbiol. 2017. PMID: 27112493

9

New CRISPR-Cas systems from uncultivated microbes.

Burstein D, Harrington LB, Strutt SC, Probst AJ, Anantharaman K, Thomas BC, Doudna JA, Banfield JF. Burstein D, et al. Among authors: banfield jf. Nature. 2017 Feb 9;542(7640):237-241. doi: 10.1038/nature21059. Epub 2016 Dec 22. Nature. 2017. PMID: 28005056 Free PMC article.

10

Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth rates.

Olm MR, Brown CT, Brooks B, Firek B, Baker R, Burstein D, Soenjoyo K, Thomas BC, Morowitz M, Banfield JF. Olm MR, et al. Among authors: banfield jf. Genome Res. 2017 Apr;27(4):601-612. doi: 10.1101/gr.213256.116. Epub 2017 Jan 10. Genome Res. 2017. PMID: 28073918 Free PMC article.

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