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Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization.
Bailet B, Apothéloz-Perret-Gentil L, Baričević A, Chonova T, Franc A, Frigerio JM, Kelly M, Mora D, Pfannkuchen M, Proft S, Ramon M, Vasselon V, Zimmermann J, Kahlert M. Bailet B, et al. Among authors: chonova t. Sci Total Environ. 2020 Nov 25;745:140948. doi: 10.1016/j.scitotenv.2020.140948. Epub 2020 Jul 18. Sci Total Environ. 2020. PMID: 32736102 Free article.
Cyprus' diatom diversity and the association of environmental and anthropogenic influences for ecological assessment of rivers using DNA metabarcoding.
Pissaridou P, Vasselon V, Christou A, Chonova T, Papatheodoulou A, Drakou K, Tziortzis I, Dörflinger G, Rimet F, Bouchez A, Vasquez MI. Pissaridou P, et al. Among authors: chonova t. Chemosphere. 2021 Jun;272:129814. doi: 10.1016/j.chemosphere.2021.129814. Epub 2021 Feb 1. Chemosphere. 2021. PMID: 33582508
Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring.
Sagova-Mareckova M, Boenigk J, Bouchez A, Cermakova K, Chonova T, Cordier T, Eisendle U, Elersek T, Fazi S, Fleituch T, Frühe L, Gajdosova M, Graupner N, Haegerbaeumer A, Kelly AM, Kopecky J, Leese F, Nõges P, Orlic S, Panksep K, Pawlowski J, Petrusek A, Piggott JJ, Rusch JC, Salis R, Schenk J, Simek K, Stovicek A, Strand DA, Vasquez MI, Vrålstad T, Zlatkovic S, Zupancic M, Stoeck T. Sagova-Mareckova M, et al. Among authors: chonova t. Water Res. 2021 Mar 1;191:116767. doi: 10.1016/j.watres.2020.116767. Epub 2020 Dec 23. Water Res. 2021. PMID: 33418487 Free article. Review.
SIPIBEL observatory: Data on usual pollutants (solids, organic matter, nutrients, ions) and micropollutants (pharmaceuticals, surfactants, metals), biological and ecotoxicity indicators in hospital and urban wastewater, in treated effluent and sludge from wastewater treatment plant, and in surface and groundwater.
Bertrand-Krajewski JL, Bournique R, Lecomte V, Pernin N, Wiest L, Bazin C, Bouchez A, Brelot E, Cournoyer B, Chonova T, Dagot C, Di Majo P, Gonzalez-Ospina A, Klein A, Labanowski J, Lévi Y, Perrodin Y, Rabello-Vargas S, Reuilly L, Roch A, Wahl A. Bertrand-Krajewski JL, et al. Among authors: chonova t. Data Brief. 2021 Dec 16;40:107726. doi: 10.1016/j.dib.2021.107726. eCollection 2022 Feb. Data Brief. 2021. PMID: 34993289 Free PMC article.
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